Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
NECTIN4Q96NY8 GPR89P-201ENST00000407924 1495 ntBASIC18.44■□□□□ 0.54
NECTIN4Q96NY8 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NECTIN4Q96NY8 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
NECTIN4Q96NY8 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NECTIN4Q96NY8 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NECTIN4Q96NY8 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NECTIN4Q96NY8 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.43■□□□□ 0.54
NECTIN4Q96NY8 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NECTIN4Q96NY8 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.43■□□□□ 0.54
NECTIN4Q96NY8 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
NECTIN4Q96NY8 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NECTIN4Q96NY8 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NECTIN4Q96NY8 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NECTIN4Q96NY8 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NECTIN4Q96NY8 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.43■□□□□ 0.54
NECTIN4Q96NY8 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.43■□□□□ 0.54
NECTIN4Q96NY8 ACTG1P14-201ENST00000446382 1122 ntBASIC18.43■□□□□ 0.54
NECTIN4Q96NY8 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NECTIN4Q96NY8 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.43■□□□□ 0.54
NECTIN4Q96NY8 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NECTIN4Q96NY8 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
NECTIN4Q96NY8 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.43■□□□□ 0.54
NECTIN4Q96NY8 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.43■□□□□ 0.54
NECTIN4Q96NY8 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NECTIN4Q96NY8 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
NECTIN4Q96NY8 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.43■□□□□ 0.54
NECTIN4Q96NY8 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NECTIN4Q96NY8 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
NECTIN4Q96NY8 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
NECTIN4Q96NY8 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
NECTIN4Q96NY8 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.43■□□□□ 0.54
NECTIN4Q96NY8 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NECTIN4Q96NY8 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
NECTIN4Q96NY8 AL499627.1-201ENST00000569373 2188 ntBASIC18.42■□□□□ 0.54
NECTIN4Q96NY8 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NECTIN4Q96NY8 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NECTIN4Q96NY8 AC132938.6-201ENST00000623828 1655 ntBASIC18.42■□□□□ 0.54
NECTIN4Q96NY8 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NECTIN4Q96NY8 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.42■□□□□ 0.54
NECTIN4Q96NY8 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NECTIN4Q96NY8 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NECTIN4Q96NY8 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
NECTIN4Q96NY8 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.42■□□□□ 0.54
NECTIN4Q96NY8 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.42■□□□□ 0.54
NECTIN4Q96NY8 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
NECTIN4Q96NY8 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.42■□□□□ 0.54
NECTIN4Q96NY8 AC106028.4-201ENST00000614509 607 ntBASIC18.42■□□□□ 0.54
NECTIN4Q96NY8 AC010654.1-201ENST00000615722 808 ntBASIC18.42■□□□□ 0.54
NECTIN4Q96NY8 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.42■□□□□ 0.54
NECTIN4Q96NY8 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NECTIN4Q96NY8 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.42■□□□□ 0.54
NECTIN4Q96NY8 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NECTIN4Q96NY8 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
NECTIN4Q96NY8 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.41■□□□□ 0.54
NECTIN4Q96NY8 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
NECTIN4Q96NY8 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NECTIN4Q96NY8 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
NECTIN4Q96NY8 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NECTIN4Q96NY8 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NECTIN4Q96NY8 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.41■□□□□ 0.54
NECTIN4Q96NY8 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
NECTIN4Q96NY8 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
NECTIN4Q96NY8 AL353593.2-201ENST00000602529 1483 ntBASIC18.41■□□□□ 0.54
NECTIN4Q96NY8 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NECTIN4Q96NY8 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NECTIN4Q96NY8 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NECTIN4Q96NY8 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.41■□□□□ 0.54
NECTIN4Q96NY8 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NECTIN4Q96NY8 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.41■□□□□ 0.54
NECTIN4Q96NY8 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.41■□□□□ 0.54
NECTIN4Q96NY8 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
NECTIN4Q96NY8 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.41■□□□□ 0.54
NECTIN4Q96NY8 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.41■□□□□ 0.54
NECTIN4Q96NY8 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NECTIN4Q96NY8 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.41■□□□□ 0.54
NECTIN4Q96NY8 PDPK2P-202ENST00000562415 1191 ntBASIC18.41■□□□□ 0.54
NECTIN4Q96NY8 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.41■□□□□ 0.54
NECTIN4Q96NY8 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.41■□□□□ 0.54
NECTIN4Q96NY8 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.41■□□□□ 0.54
NECTIN4Q96NY8 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
NECTIN4Q96NY8 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
NECTIN4Q96NY8 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NECTIN4Q96NY8 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NECTIN4Q96NY8 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.4■□□□□ 0.54
NECTIN4Q96NY8 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NECTIN4Q96NY8 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NECTIN4Q96NY8 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
NECTIN4Q96NY8 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.4■□□□□ 0.54
NECTIN4Q96NY8 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NECTIN4Q96NY8 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
NECTIN4Q96NY8 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NECTIN4Q96NY8 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.4■□□□□ 0.54
NECTIN4Q96NY8 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
NECTIN4Q96NY8 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.4■□□□□ 0.54
NECTIN4Q96NY8 SIGLEC30P-201ENST00000455569 941 ntBASIC18.4■□□□□ 0.54
NECTIN4Q96NY8 AP000344.2-201ENST00000512987 629 ntBASIC18.4■□□□□ 0.54
NECTIN4Q96NY8 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
NECTIN4Q96NY8 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.4■□□□□ 0.54
NECTIN4Q96NY8 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms