Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CFAP54Q96N23 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CFAP54Q96N23 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CFAP54Q96N23 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CFAP54Q96N23 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CFAP54Q96N23 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CFAP54Q96N23 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.41■□□□□ 0.38
CFAP54Q96N23 HCG4-201ENST00000418983 998 ntBASIC17.41■□□□□ 0.38
CFAP54Q96N23 FAM58DP-201ENST00000428076 619 ntBASIC17.41■□□□□ 0.38
CFAP54Q96N23 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.41■□□□□ 0.38
CFAP54Q96N23 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CFAP54Q96N23 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.41■□□□□ 0.38
CFAP54Q96N23 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CFAP54Q96N23 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.41■□□□□ 0.38
CFAP54Q96N23 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CFAP54Q96N23 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.41■□□□□ 0.38
CFAP54Q96N23 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CFAP54Q96N23 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CFAP54Q96N23 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CFAP54Q96N23 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CFAP54Q96N23 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.41■□□□□ 0.38
CFAP54Q96N23 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
CFAP54Q96N23 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP54Q96N23 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
CFAP54Q96N23 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.4■□□□□ 0.38
CFAP54Q96N23 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP54Q96N23 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP54Q96N23 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP54Q96N23 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CFAP54Q96N23 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP54Q96N23 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP54Q96N23 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP54Q96N23 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.4■□□□□ 0.38
CFAP54Q96N23 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.4■□□□□ 0.38
CFAP54Q96N23 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP54Q96N23 AC025580.3-201ENST00000617932 1424 ntBASIC17.4■□□□□ 0.38
CFAP54Q96N23 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP54Q96N23 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP54Q96N23 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.4■□□□□ 0.38
CFAP54Q96N23 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.4■□□□□ 0.38
CFAP54Q96N23 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP54Q96N23 AL512356.2-201ENST00000546955 174 ntBASIC17.4■□□□□ 0.38
CFAP54Q96N23 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.4■□□□□ 0.38
CFAP54Q96N23 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP54Q96N23 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.4■□□□□ 0.38
CFAP54Q96N23 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP54Q96N23 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP54Q96N23 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CFAP54Q96N23 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
CFAP54Q96N23 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.39■□□□□ 0.38
CFAP54Q96N23 KLF2P3-201ENST00000451977 1087 ntBASIC17.39■□□□□ 0.38
CFAP54Q96N23 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.39■□□□□ 0.38
CFAP54Q96N23 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.39■□□□□ 0.38
CFAP54Q96N23 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.39■□□□□ 0.38
CFAP54Q96N23 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP54Q96N23 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CFAP54Q96N23 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.39■□□□□ 0.37
CFAP54Q96N23 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP54Q96N23 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP54Q96N23 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
CFAP54Q96N23 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP54Q96N23 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.39■□□□□ 0.37
CFAP54Q96N23 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.39■□□□□ 0.37
CFAP54Q96N23 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.39■□□□□ 0.37
CFAP54Q96N23 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CFAP54Q96N23 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.39■□□□□ 0.37
CFAP54Q96N23 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP54Q96N23 IGHV3-72-202ENST00000621503 303 ntBASIC17.39■□□□□ 0.37
CFAP54Q96N23 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.39■□□□□ 0.37
CFAP54Q96N23 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP54Q96N23 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP54Q96N23 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP54Q96N23 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP54Q96N23 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP54Q96N23 BCYRN1-201ENST00000418539 200 ntBASIC17.39■□□□□ 0.37
CFAP54Q96N23 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.39■□□□□ 0.37
CFAP54Q96N23 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.39■□□□□ 0.37
CFAP54Q96N23 TUBB3P1-201ENST00000405796 1332 ntBASIC17.38■□□□□ 0.37
CFAP54Q96N23 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CFAP54Q96N23 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CFAP54Q96N23 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.38■□□□□ 0.37
CFAP54Q96N23 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CFAP54Q96N23 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CFAP54Q96N23 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.38■□□□□ 0.37
CFAP54Q96N23 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CFAP54Q96N23 ACA64.2-201ENST00000459014 129 ntBASIC17.38■□□□□ 0.37
CFAP54Q96N23 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.38■□□□□ 0.37
CFAP54Q96N23 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.38■□□□□ 0.37
CFAP54Q96N23 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CFAP54Q96N23 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CFAP54Q96N23 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
CFAP54Q96N23 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CFAP54Q96N23 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CFAP54Q96N23 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CFAP54Q96N23 PRYP5-201ENST00000451909 266 ntBASIC17.38■□□□□ 0.37
CFAP54Q96N23 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CFAP54Q96N23 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.37■□□□□ 0.37
CFAP54Q96N23 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.37■□□□□ 0.37
CFAP54Q96N23 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CFAP54Q96N23 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms