Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TIMD4Q96H15 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TIMD4Q96H15 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TIMD4Q96H15 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TIMD4Q96H15 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TIMD4Q96H15 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TIMD4Q96H15 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TIMD4Q96H15 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TIMD4Q96H15 AC125634.1-201ENST00000438758 1403 ntBASIC15□□□□□ -0.01
TIMD4Q96H15 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15□□□□□ -0.01
TIMD4Q96H15 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TIMD4Q96H15 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC15□□□□□ -0.01
TIMD4Q96H15 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15□□□□□ -0.01
TIMD4Q96H15 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
TIMD4Q96H15 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TIMD4Q96H15 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TIMD4Q96H15 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TIMD4Q96H15 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC15□□□□□ -0.01
TIMD4Q96H15 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15□□□□□ -0.01
TIMD4Q96H15 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TIMD4Q96H15 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC15□□□□□ -0.01
TIMD4Q96H15 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
TIMD4Q96H15 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15□□□□□ -0.01
TIMD4Q96H15 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15□□□□□ -0.01
TIMD4Q96H15 EMBP1-201ENST00000458200 901 ntBASIC15□□□□□ -0.01
TIMD4Q96H15 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC15□□□□□ -0.01
TIMD4Q96H15 DUTP2-201ENST00000519164 463 ntBASIC15□□□□□ -0.01
TIMD4Q96H15 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15□□□□□ -0.01
TIMD4Q96H15 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15□□□□□ -0.01
TIMD4Q96H15 AC005336.2-201ENST00000593183 939 ntBASIC15□□□□□ -0.01
TIMD4Q96H15 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15□□□□□ -0.01
TIMD4Q96H15 AL138831.2-201ENST00000606564 490 ntBASIC15□□□□□ -0.01
TIMD4Q96H15 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
TIMD4Q96H15 AC116407.2-201ENST00000613639 860 ntBASIC15□□□□□ -0.01
TIMD4Q96H15 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15□□□□□ -0.01
TIMD4Q96H15 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
TIMD4Q96H15 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC15□□□□□ -0.01
TIMD4Q96H15 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
TIMD4Q96H15 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
TIMD4Q96H15 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC15□□□□□ -0.01
TIMD4Q96H15 AC098818.2-201ENST00000564925 2320 ntBASIC15□□□□□ -0.01
TIMD4Q96H15 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
TIMD4Q96H15 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TIMD4Q96H15 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
TIMD4Q96H15 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TIMD4Q96H15 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC15□□□□□ -0.01
TIMD4Q96H15 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15□□□□□ -0.01
TIMD4Q96H15 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15□□□□□ -0.01
TIMD4Q96H15 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TIMD4Q96H15 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15□□□□□ -0.01
TIMD4Q96H15 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC15□□□□□ -0.01
TIMD4Q96H15 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC14.99□□□□□ -0.01
TIMD4Q96H15 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TIMD4Q96H15 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.99□□□□□ -0.01
TIMD4Q96H15 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.99□□□□□ -0.01
TIMD4Q96H15 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TIMD4Q96H15 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
TIMD4Q96H15 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TIMD4Q96H15 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TIMD4Q96H15 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.99□□□□□ -0.01
TIMD4Q96H15 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TIMD4Q96H15 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TIMD4Q96H15 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC14.99□□□□□ -0.01
TIMD4Q96H15 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.99□□□□□ -0.01
TIMD4Q96H15 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
TIMD4Q96H15 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TIMD4Q96H15 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.99□□□□□ -0.01
TIMD4Q96H15 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.99□□□□□ -0.01
TIMD4Q96H15 AC064862.7-201ENST00000604520 867 ntBASIC14.99□□□□□ -0.01
TIMD4Q96H15 REXO1L6P-202ENST00000619970 1078 ntBASIC14.99□□□□□ -0.01
TIMD4Q96H15 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TIMD4Q96H15 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TIMD4Q96H15 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TIMD4Q96H15 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC14.99□□□□□ -0.01
TIMD4Q96H15 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
TIMD4Q96H15 AC132938.6-201ENST00000623828 1655 ntBASIC14.99□□□□□ -0.01
TIMD4Q96H15 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.99□□□□□ -0.01
TIMD4Q96H15 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TIMD4Q96H15 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TIMD4Q96H15 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TIMD4Q96H15 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TIMD4Q96H15 AC093503.3-201ENST00000624917 2352 ntBASIC14.98□□□□□ -0.01
TIMD4Q96H15 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TIMD4Q96H15 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TIMD4Q96H15 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC14.98□□□□□ -0.01
TIMD4Q96H15 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TIMD4Q96H15 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TIMD4Q96H15 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TIMD4Q96H15 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
TIMD4Q96H15 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC14.98□□□□□ -0.01
TIMD4Q96H15 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TIMD4Q96H15 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TIMD4Q96H15 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TIMD4Q96H15 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TIMD4Q96H15 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TIMD4Q96H15 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.98□□□□□ -0.01
TIMD4Q96H15 RCN1P2-201ENST00000398357 915 ntBASIC14.98□□□□□ -0.01
TIMD4Q96H15 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.98□□□□□ -0.01
TIMD4Q96H15 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TIMD4Q96H15 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms