Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 Z69720.1-201ENST00000601483 472 ntBASIC16.55■□□□□ 0.24
CTHRC1Q96CG8 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTHRC1Q96CG8 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
CTHRC1Q96CG8 LINC01451-201ENST00000623792 534 ntBASIC16.55■□□□□ 0.24
CTHRC1Q96CG8 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTHRC1Q96CG8 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CTHRC1Q96CG8 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.55■□□□□ 0.24
CTHRC1Q96CG8 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CTHRC1Q96CG8 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CTHRC1Q96CG8 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.55■□□□□ 0.24
CTHRC1Q96CG8 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTHRC1Q96CG8 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.55■□□□□ 0.24
CTHRC1Q96CG8 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.55■□□□□ 0.24
CTHRC1Q96CG8 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTHRC1Q96CG8 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.55■□□□□ 0.24
CTHRC1Q96CG8 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.55■□□□□ 0.24
CTHRC1Q96CG8 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTHRC1Q96CG8 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.54■□□□□ 0.24
CTHRC1Q96CG8 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CTHRC1Q96CG8 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
CTHRC1Q96CG8 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTHRC1Q96CG8 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.54■□□□□ 0.24
CTHRC1Q96CG8 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.54■□□□□ 0.24
CTHRC1Q96CG8 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CTHRC1Q96CG8 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.54■□□□□ 0.24
CTHRC1Q96CG8 AC133963.1-201ENST00000504166 1679 ntBASIC16.54■□□□□ 0.24
CTHRC1Q96CG8 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTHRC1Q96CG8 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTHRC1Q96CG8 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTHRC1Q96CG8 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTHRC1Q96CG8 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CTHRC1Q96CG8 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.54■□□□□ 0.24
CTHRC1Q96CG8 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.54■□□□□ 0.24
CTHRC1Q96CG8 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.54■□□□□ 0.24
CTHRC1Q96CG8 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTHRC1Q96CG8 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CTHRC1Q96CG8 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CTHRC1Q96CG8 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.54■□□□□ 0.24
CTHRC1Q96CG8 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
CTHRC1Q96CG8 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.54■□□□□ 0.24
CTHRC1Q96CG8 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.54■□□□□ 0.24
CTHRC1Q96CG8 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.54■□□□□ 0.24
CTHRC1Q96CG8 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CTHRC1Q96CG8 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CTHRC1Q96CG8 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTHRC1Q96CG8 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CTHRC1Q96CG8 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTHRC1Q96CG8 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CTHRC1Q96CG8 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CTHRC1Q96CG8 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CTHRC1Q96CG8 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTHRC1Q96CG8 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CTHRC1Q96CG8 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTHRC1Q96CG8 PCDHB18P-201ENST00000524813 2368 ntBASIC16.53■□□□□ 0.24
CTHRC1Q96CG8 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTHRC1Q96CG8 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTHRC1Q96CG8 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.53■□□□□ 0.24
CTHRC1Q96CG8 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CTHRC1Q96CG8 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CTHRC1Q96CG8 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CTHRC1Q96CG8 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.53■□□□□ 0.24
CTHRC1Q96CG8 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CTHRC1Q96CG8 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.53■□□□□ 0.24
CTHRC1Q96CG8 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTHRC1Q96CG8 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CTHRC1Q96CG8 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTHRC1Q96CG8 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.53■□□□□ 0.24
CTHRC1Q96CG8 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.53■□□□□ 0.24
CTHRC1Q96CG8 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CTHRC1Q96CG8 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTHRC1Q96CG8 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTHRC1Q96CG8 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTHRC1Q96CG8 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
CTHRC1Q96CG8 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.53■□□□□ 0.24
CTHRC1Q96CG8 KRT17P6-201ENST00000453795 1220 ntBASIC16.53■□□□□ 0.24
CTHRC1Q96CG8 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.53■□□□□ 0.24
CTHRC1Q96CG8 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.53■□□□□ 0.24
CTHRC1Q96CG8 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.53■□□□□ 0.24
CTHRC1Q96CG8 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.53■□□□□ 0.24
CTHRC1Q96CG8 AC009533.2-201ENST00000543664 586 ntBASIC16.53■□□□□ 0.24
CTHRC1Q96CG8 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.53■□□□□ 0.24
CTHRC1Q96CG8 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CTHRC1Q96CG8 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.53■□□□□ 0.24
CTHRC1Q96CG8 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.53■□□□□ 0.24
CTHRC1Q96CG8 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.53■□□□□ 0.24
CTHRC1Q96CG8 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.53■□□□□ 0.24
CTHRC1Q96CG8 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.53■□□□□ 0.24
CTHRC1Q96CG8 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTHRC1Q96CG8 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTHRC1Q96CG8 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTHRC1Q96CG8 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTHRC1Q96CG8 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTHRC1Q96CG8 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CTHRC1Q96CG8 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTHRC1Q96CG8 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.53■□□□□ 0.24
CTHRC1Q96CG8 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CTHRC1Q96CG8 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CTHRC1Q96CG8 HLA-J-201ENST00000462773 1622 ntBASIC16.52■□□□□ 0.24
CTHRC1Q96CG8 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CTHRC1Q96CG8 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms