Protein–RNA interactions for Protein: Q969T3

SNX21, Sorting nexin-21, humanhuman

Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21Q969T3 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.18■□□□□ 0.98
SNX21Q969T3 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC21.18■□□□□ 0.98
SNX21Q969T3 AC026471.5-201ENST00000615068 467 ntBASIC21.18■□□□□ 0.98
SNX21Q969T3 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SNX21Q969T3 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SNX21Q969T3 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
SNX21Q969T3 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SNX21Q969T3 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SNX21Q969T3 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SNX21Q969T3 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC21.18■□□□□ 0.98
SNX21Q969T3 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC21.18■□□□□ 0.98
SNX21Q969T3 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
SNX21Q969T3 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SNX21Q969T3 AC116353.5-201ENST00000638148 1699 ntBASIC21.18■□□□□ 0.98
SNX21Q969T3 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SNX21Q969T3 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SNX21Q969T3 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
SNX21Q969T3 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNX21Q969T3 PCDHB19P-201ENST00000570871 2371 ntBASIC21.17■□□□□ 0.98
SNX21Q969T3 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNX21Q969T3 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SNX21Q969T3 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
SNX21Q969T3 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.17■□□□□ 0.98
SNX21Q969T3 AC005104.2-201ENST00000427818 678 ntBASIC21.17■□□□□ 0.98
SNX21Q969T3 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.17■□□□□ 0.98
SNX21Q969T3 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC21.17■□□□□ 0.98
SNX21Q969T3 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.17■□□□□ 0.98
SNX21Q969T3 AC010653.2-201ENST00000623505 997 ntBASIC21.17■□□□□ 0.98
SNX21Q969T3 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNX21Q969T3 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNX21Q969T3 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNX21Q969T3 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNX21Q969T3 RHBDF1P1-201ENST00000427504 1941 ntBASIC21.17■□□□□ 0.98
SNX21Q969T3 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SNX21Q969T3 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNX21Q969T3 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNX21Q969T3 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
SNX21Q969T3 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC21.17■□□□□ 0.98
SNX21Q969T3 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC21.17■□□□□ 0.98
SNX21Q969T3 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNX21Q969T3 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
SNX21Q969T3 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNX21Q969T3 AC018695.7-201ENST00000624587 2492 ntBASIC21.16■□□□□ 0.98
SNX21Q969T3 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNX21Q969T3 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SNX21Q969T3 LYSMD4-203ENST00000378904 2122 ntBASIC21.16■□□□□ 0.98
SNX21Q969T3 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SNX21Q969T3 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SNX21Q969T3 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC21.16■□□□□ 0.98
SNX21Q969T3 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
SNX21Q969T3 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNX21Q969T3 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SNX21Q969T3 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
SNX21Q969T3 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNX21Q969T3 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNX21Q969T3 PVRIG2P-201ENST00000435460 978 ntBASIC21.16■□□□□ 0.98
SNX21Q969T3 GXYLT1P6-201ENST00000456472 1187 ntBASIC21.16■□□□□ 0.98
SNX21Q969T3 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.16■□□□□ 0.98
SNX21Q969T3 CD99P1-205ENST00000527459 561 ntBASIC21.16■□□□□ 0.98
SNX21Q969T3 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNX21Q969T3 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.16■□□□□ 0.98
SNX21Q969T3 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SNX21Q969T3 MIR3917-201ENST00000580971 93 ntBASIC21.16■□□□□ 0.98
SNX21Q969T3 AC116562.4-202ENST00000641738 218 ntBASIC21.16■□□□□ 0.98
SNX21Q969T3 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC21.16■□□□□ 0.98
SNX21Q969T3 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SNX21Q969T3 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNX21Q969T3 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SNX21Q969T3 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNX21Q969T3 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
SNX21Q969T3 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNX21Q969T3 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNX21Q969T3 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNX21Q969T3 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SNX21Q969T3 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SNX21Q969T3 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
SNX21Q969T3 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNX21Q969T3 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC21.15■□□□□ 0.98
SNX21Q969T3 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNX21Q969T3 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC21.15■□□□□ 0.98
SNX21Q969T3 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SNX21Q969T3 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SNX21Q969T3 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.15■□□□□ 0.98
SNX21Q969T3 KRT18P65-201ENST00000439811 1286 ntBASIC21.15■□□□□ 0.98
SNX21Q969T3 RBM17P1-201ENST00000453646 1190 ntBASIC21.15■□□□□ 0.98
SNX21Q969T3 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SNX21Q969T3 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.15■□□□□ 0.98
SNX21Q969T3 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNX21Q969T3 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
SNX21Q969T3 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNX21Q969T3 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SNX21Q969T3 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC21.15■□□□□ 0.98
SNX21Q969T3 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC21.15■□□□□ 0.98
SNX21Q969T3 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNX21Q969T3 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
SNX21Q969T3 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
SNX21Q969T3 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
SNX21Q969T3 PBK-203ENST00000522944 1499 ntTSL 2 BASIC21.14■□□□□ 0.98
SNX21Q969T3 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
SNX21Q969T3 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC21.14■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms