Protein–RNA interactions for Protein: Q95460

MR1, Major histocompatibility complex class I-related gene protein, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MR1Q95460 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
MR1Q95460 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MR1Q95460 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.82■□□□□ 0.28
MR1Q95460 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MR1Q95460 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MR1Q95460 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MR1Q95460 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MR1Q95460 AC243591.1-201ENST00000452967 1364 ntBASIC16.82■□□□□ 0.28
MR1Q95460 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.82■□□□□ 0.28
MR1Q95460 AC022898.2-201ENST00000616822 1312 ntBASIC16.82■□□□□ 0.28
MR1Q95460 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MR1Q95460 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MR1Q95460 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MR1Q95460 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MR1Q95460 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MR1Q95460 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.82■□□□□ 0.28
MR1Q95460 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.82■□□□□ 0.28
MR1Q95460 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.82■□□□□ 0.28
MR1Q95460 AC007967.3-201ENST00000434308 558 ntBASIC16.82■□□□□ 0.28
MR1Q95460 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MR1Q95460 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MR1Q95460 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.82■□□□□ 0.28
MR1Q95460 SLC25A1P1-201ENST00000528351 927 ntBASIC16.82■□□□□ 0.28
MR1Q95460 SART3-203ENST00000546611 1184 ntBASIC16.82■□□□□ 0.28
MR1Q95460 AC021087.4-201ENST00000563761 564 ntBASIC16.82■□□□□ 0.28
MR1Q95460 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.82■□□□□ 0.28
MR1Q95460 AC139887.3-201ENST00000568585 713 ntBASIC16.82■□□□□ 0.28
MR1Q95460 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.82■□□□□ 0.28
MR1Q95460 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MR1Q95460 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.82■□□□□ 0.28
MR1Q95460 FAM215A-202ENST00000632077 792 ntBASIC16.82■□□□□ 0.28
MR1Q95460 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
MR1Q95460 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.82■□□□□ 0.28
MR1Q95460 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MR1Q95460 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MR1Q95460 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MR1Q95460 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MR1Q95460 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.82■□□□□ 0.28
MR1Q95460 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
MR1Q95460 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MR1Q95460 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MR1Q95460 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MR1Q95460 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MR1Q95460 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
MR1Q95460 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
MR1Q95460 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
MR1Q95460 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MR1Q95460 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
MR1Q95460 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
MR1Q95460 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
MR1Q95460 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MR1Q95460 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
MR1Q95460 AC093010.1-201ENST00000473625 1624 ntBASIC16.81■□□□□ 0.28
MR1Q95460 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
MR1Q95460 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MR1Q95460 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.81■□□□□ 0.28
MR1Q95460 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
MR1Q95460 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MR1Q95460 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
MR1Q95460 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MR1Q95460 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MR1Q95460 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MR1Q95460 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.81■□□□□ 0.28
MR1Q95460 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
MR1Q95460 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.81■□□□□ 0.28
MR1Q95460 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
MR1Q95460 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
MR1Q95460 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
MR1Q95460 HNRNPDP1-201ENST00000439535 754 ntBASIC16.81■□□□□ 0.28
MR1Q95460 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
MR1Q95460 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.81■□□□□ 0.28
MR1Q95460 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.81■□□□□ 0.28
MR1Q95460 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.81■□□□□ 0.28
MR1Q95460 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.81■□□□□ 0.28
MR1Q95460 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
MR1Q95460 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.81■□□□□ 0.28
MR1Q95460 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.81■□□□□ 0.28
MR1Q95460 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.81■□□□□ 0.28
MR1Q95460 MIR7706-201ENST00000613747 67 ntBASIC16.81■□□□□ 0.28
MR1Q95460 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
MR1Q95460 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
MR1Q95460 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
MR1Q95460 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MR1Q95460 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
MR1Q95460 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MR1Q95460 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
MR1Q95460 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MR1Q95460 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MR1Q95460 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MR1Q95460 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MR1Q95460 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MR1Q95460 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MR1Q95460 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
MR1Q95460 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MR1Q95460 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
MR1Q95460 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
MR1Q95460 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MR1Q95460 AC097374.2-201ENST00000618617 1306 ntBASIC16.8■□□□□ 0.28
MR1Q95460 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.8■□□□□ 0.28
MR1Q95460 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms