Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 KRT18P57-201ENST00000443599 1254 ntBASIC15.75■□□□□ 0.11
RAB40AQ8WXH6 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
RAB40AQ8WXH6 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.75■□□□□ 0.11
RAB40AQ8WXH6 AC010331.1-201ENST00000611423 582 ntBASIC15.75■□□□□ 0.11
RAB40AQ8WXH6 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RAB40AQ8WXH6 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.75■□□□□ 0.11
RAB40AQ8WXH6 AC092338.2-201ENST00000568827 1415 ntBASIC15.75■□□□□ 0.11
RAB40AQ8WXH6 AC073508.3-201ENST00000619697 1419 ntBASIC15.75■□□□□ 0.11
RAB40AQ8WXH6 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAB40AQ8WXH6 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
RAB40AQ8WXH6 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.75■□□□□ 0.11
RAB40AQ8WXH6 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.75■□□□□ 0.11
RAB40AQ8WXH6 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
RAB40AQ8WXH6 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40AQ8WXH6 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40AQ8WXH6 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40AQ8WXH6 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40AQ8WXH6 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC15.74■□□□□ 0.11
RAB40AQ8WXH6 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40AQ8WXH6 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40AQ8WXH6 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.74■□□□□ 0.11
RAB40AQ8WXH6 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40AQ8WXH6 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40AQ8WXH6 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.74■□□□□ 0.11
RAB40AQ8WXH6 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40AQ8WXH6 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40AQ8WXH6 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40AQ8WXH6 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC15.74■□□□□ 0.11
RAB40AQ8WXH6 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC15.74■□□□□ 0.11
RAB40AQ8WXH6 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40AQ8WXH6 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.74■□□□□ 0.11
RAB40AQ8WXH6 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40AQ8WXH6 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
RAB40AQ8WXH6 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.74■□□□□ 0.11
RAB40AQ8WXH6 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40AQ8WXH6 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
RAB40AQ8WXH6 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40AQ8WXH6 AC022211.2-201ENST00000585075 2527 ntBASIC15.74■□□□□ 0.11
RAB40AQ8WXH6 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40AQ8WXH6 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.74■□□□□ 0.11
RAB40AQ8WXH6 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40AQ8WXH6 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40AQ8WXH6 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40AQ8WXH6 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40AQ8WXH6 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40AQ8WXH6 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.74■□□□□ 0.11
RAB40AQ8WXH6 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40AQ8WXH6 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40AQ8WXH6 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.74■□□□□ 0.11
RAB40AQ8WXH6 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40AQ8WXH6 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40AQ8WXH6 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40AQ8WXH6 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB40AQ8WXH6 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB40AQ8WXH6 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.73■□□□□ 0.11
RAB40AQ8WXH6 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB40AQ8WXH6 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB40AQ8WXH6 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB40AQ8WXH6 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB40AQ8WXH6 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB40AQ8WXH6 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB40AQ8WXH6 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RAB40AQ8WXH6 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RAB40AQ8WXH6 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC15.73■□□□□ 0.11
RAB40AQ8WXH6 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC15.73■□□□□ 0.11
RAB40AQ8WXH6 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC15.73■□□□□ 0.11
RAB40AQ8WXH6 AC010203.1-204ENST00000548782 407 ntBASIC15.73■□□□□ 0.11
RAB40AQ8WXH6 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
RAB40AQ8WXH6 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RAB40AQ8WXH6 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB40AQ8WXH6 AC011676.5-201ENST00000624864 2660 ntBASIC15.73■□□□□ 0.11
RAB40AQ8WXH6 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
RAB40AQ8WXH6 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RAB40AQ8WXH6 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB40AQ8WXH6 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
RAB40AQ8WXH6 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB40AQ8WXH6 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
RAB40AQ8WXH6 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB40AQ8WXH6 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB40AQ8WXH6 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.73■□□□□ 0.11
RAB40AQ8WXH6 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40AQ8WXH6 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40AQ8WXH6 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
RAB40AQ8WXH6 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.72■□□□□ 0.11
RAB40AQ8WXH6 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40AQ8WXH6 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40AQ8WXH6 LGALS8-AS1-201ENST00000487567 1457 ntBASIC15.72■□□□□ 0.11
RAB40AQ8WXH6 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40AQ8WXH6 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40AQ8WXH6 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40AQ8WXH6 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40AQ8WXH6 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RAB40AQ8WXH6 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
RAB40AQ8WXH6 AL138688.1-201ENST00000624851 1594 ntBASIC15.72■□□□□ 0.11
RAB40AQ8WXH6 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40AQ8WXH6 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40AQ8WXH6 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.72■□□□□ 0.11
RAB40AQ8WXH6 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC15.72■□□□□ 0.11
RAB40AQ8WXH6 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
RAB40AQ8WXH6 GXYLT1P6-201ENST00000456472 1187 ntBASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms