Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 WDR53-204ENST00000433160 887 ntTSL 5 BASIC7.15□□□□□ -1.26
SYNE2Q8WXH0 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC7.15□□□□□ -1.26
SYNE2Q8WXH0 HLA-C-210ENST00000640219 976 ntBASIC7.15□□□□□ -1.26
SYNE2Q8WXH0 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
SYNE2Q8WXH0 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
SYNE2Q8WXH0 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
SYNE2Q8WXH0 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC7.15□□□□□ -1.26
SYNE2Q8WXH0 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC7.15□□□□□ -1.26
SYNE2Q8WXH0 AL022328.3-201ENST00000607943 679 ntBASIC7.15□□□□□ -1.26
SYNE2Q8WXH0 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC7.15□□□□□ -1.26
SYNE2Q8WXH0 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
SYNE2Q8WXH0 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC7.15□□□□□ -1.26
SYNE2Q8WXH0 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
SYNE2Q8WXH0 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
SYNE2Q8WXH0 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
SYNE2Q8WXH0 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
SYNE2Q8WXH0 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
SYNE2Q8WXH0 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC7.15□□□□□ -1.26
SYNE2Q8WXH0 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
SYNE2Q8WXH0 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
SYNE2Q8WXH0 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC7.15□□□□□ -1.26
SYNE2Q8WXH0 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
SYNE2Q8WXH0 AC006033.1-201ENST00000440505 426 ntBASIC7.15□□□□□ -1.26
SYNE2Q8WXH0 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC7.15□□□□□ -1.26
SYNE2Q8WXH0 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC7.15□□□□□ -1.26
SYNE2Q8WXH0 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
SYNE2Q8WXH0 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC7.15□□□□□ -1.26
SYNE2Q8WXH0 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC7.15□□□□□ -1.26
SYNE2Q8WXH0 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC7.15□□□□□ -1.26
SYNE2Q8WXH0 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
SYNE2Q8WXH0 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
SYNE2Q8WXH0 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
SYNE2Q8WXH0 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
SYNE2Q8WXH0 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
SYNE2Q8WXH0 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.26
SYNE2Q8WXH0 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
SYNE2Q8WXH0 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
SYNE2Q8WXH0 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
SYNE2Q8WXH0 USB1-202ENST00000423271 1217 ntTSL 2 BASIC7.15□□□□□ -1.26
SYNE2Q8WXH0 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
SYNE2Q8WXH0 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
SYNE2Q8WXH0 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC7.15□□□□□ -1.26
SYNE2Q8WXH0 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC7.15□□□□□ -1.26
SYNE2Q8WXH0 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
SYNE2Q8WXH0 AC004790.1-201ENST00000612686 536 ntBASIC7.15□□□□□ -1.26
SYNE2Q8WXH0 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
SYNE2Q8WXH0 MED16-214ENST00000617672 554 ntTSL 5 BASIC7.15□□□□□ -1.26
SYNE2Q8WXH0 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
SYNE2Q8WXH0 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
SYNE2Q8WXH0 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
SYNE2Q8WXH0 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
SYNE2Q8WXH0 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
SYNE2Q8WXH0 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.27
SYNE2Q8WXH0 AC006116.8-202ENST00000587620 1550 ntBASIC7.15□□□□□ -1.27
SYNE2Q8WXH0 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
SYNE2Q8WXH0 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC7.15□□□□□ -1.27
SYNE2Q8WXH0 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC7.15□□□□□ -1.27
SYNE2Q8WXH0 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC7.15□□□□□ -1.27
SYNE2Q8WXH0 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.27
SYNE2Q8WXH0 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC7.15□□□□□ -1.27
SYNE2Q8WXH0 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC7.15□□□□□ -1.27
SYNE2Q8WXH0 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.27
SYNE2Q8WXH0 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
SYNE2Q8WXH0 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC7.15□□□□□ -1.27
SYNE2Q8WXH0 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.27
SYNE2Q8WXH0 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC7.15□□□□□ -1.27
SYNE2Q8WXH0 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
SYNE2Q8WXH0 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
SYNE2Q8WXH0 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC7.15□□□□□ -1.27
SYNE2Q8WXH0 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.27
SYNE2Q8WXH0 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
SYNE2Q8WXH0 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC7.15□□□□□ -1.27
SYNE2Q8WXH0 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
SYNE2Q8WXH0 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
SYNE2Q8WXH0 PTCHD3P3-201ENST00000403073 906 ntBASIC7.15□□□□□ -1.27
SYNE2Q8WXH0 MAGEA5-201ENST00000446757 942 ntBASIC7.15□□□□□ -1.27
SYNE2Q8WXH0 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC7.15□□□□□ -1.27
SYNE2Q8WXH0 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC7.15□□□□□ -1.27
SYNE2Q8WXH0 RERG-205ENST00000537647 935 ntTSL 2 BASIC7.15□□□□□ -1.27
SYNE2Q8WXH0 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC7.15□□□□□ -1.27
SYNE2Q8WXH0 MIR4453-201ENST00000584019 89 ntBASIC7.15□□□□□ -1.27
SYNE2Q8WXH0 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
SYNE2Q8WXH0 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
SYNE2Q8WXH0 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 AC132938.5-201ENST00000624980 1813 ntBASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 AC010234.1-201ENST00000494599 870 ntBASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC7.14□□□□□ -1.27
SYNE2Q8WXH0 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms