Protein–RNA interactions for Protein: Q8WXE1

ATRIP, ATR-interacting protein, humanhuman

Predictions only

Length 791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIPQ8WXE1 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
ATRIPQ8WXE1 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATRIPQ8WXE1 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATRIPQ8WXE1 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATRIPQ8WXE1 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.72■□□□□ 0.75
ATRIPQ8WXE1 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.72■□□□□ 0.75
ATRIPQ8WXE1 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.72■□□□□ 0.75
ATRIPQ8WXE1 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATRIPQ8WXE1 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATRIPQ8WXE1 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATRIPQ8WXE1 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.72■□□□□ 0.75
ATRIPQ8WXE1 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATRIPQ8WXE1 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATRIPQ8WXE1 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ATRIPQ8WXE1 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATRIPQ8WXE1 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATRIPQ8WXE1 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATRIPQ8WXE1 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATRIPQ8WXE1 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.71■□□□□ 0.75
ATRIPQ8WXE1 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.71■□□□□ 0.75
ATRIPQ8WXE1 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATRIPQ8WXE1 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
ATRIPQ8WXE1 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATRIPQ8WXE1 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
ATRIPQ8WXE1 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATRIPQ8WXE1 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATRIPQ8WXE1 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.71■□□□□ 0.75
ATRIPQ8WXE1 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATRIPQ8WXE1 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATRIPQ8WXE1 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATRIPQ8WXE1 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATRIPQ8WXE1 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
ATRIPQ8WXE1 AL671277.2-201ENST00000458060 996 ntBASIC19.71■□□□□ 0.75
ATRIPQ8WXE1 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.71■□□□□ 0.75
ATRIPQ8WXE1 KRT18P41-201ENST00000518924 1277 ntBASIC19.71■□□□□ 0.75
ATRIPQ8WXE1 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATRIPQ8WXE1 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
ATRIPQ8WXE1 AC069148.1-201ENST00000608741 768 ntBASIC19.71■□□□□ 0.75
ATRIPQ8WXE1 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ATRIPQ8WXE1 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
ATRIPQ8WXE1 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
ATRIPQ8WXE1 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATRIPQ8WXE1 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
ATRIPQ8WXE1 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
ATRIPQ8WXE1 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC19.71■□□□□ 0.75
ATRIPQ8WXE1 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATRIPQ8WXE1 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
ATRIPQ8WXE1 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
ATRIPQ8WXE1 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATRIPQ8WXE1 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.7■□□□□ 0.74
ATRIPQ8WXE1 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATRIPQ8WXE1 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
ATRIPQ8WXE1 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.7■□□□□ 0.74
ATRIPQ8WXE1 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.7■□□□□ 0.74
ATRIPQ8WXE1 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
ATRIPQ8WXE1 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATRIPQ8WXE1 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATRIPQ8WXE1 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATRIPQ8WXE1 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATRIPQ8WXE1 MFAP1P1-201ENST00000442257 1255 ntBASIC19.7■□□□□ 0.74
ATRIPQ8WXE1 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.7■□□□□ 0.74
ATRIPQ8WXE1 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.7■□□□□ 0.74
ATRIPQ8WXE1 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.7■□□□□ 0.74
ATRIPQ8WXE1 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.7■□□□□ 0.74
ATRIPQ8WXE1 AC011298.2-201ENST00000617989 482 ntBASIC19.7■□□□□ 0.74
ATRIPQ8WXE1 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATRIPQ8WXE1 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.7■□□□□ 0.74
ATRIPQ8WXE1 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATRIPQ8WXE1 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATRIPQ8WXE1 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATRIPQ8WXE1 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATRIPQ8WXE1 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATRIPQ8WXE1 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATRIPQ8WXE1 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.7■□□□□ 0.74
ATRIPQ8WXE1 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
ATRIPQ8WXE1 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.69■□□□□ 0.74
ATRIPQ8WXE1 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATRIPQ8WXE1 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.69■□□□□ 0.74
ATRIPQ8WXE1 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATRIPQ8WXE1 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATRIPQ8WXE1 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATRIPQ8WXE1 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATRIPQ8WXE1 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATRIPQ8WXE1 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATRIPQ8WXE1 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATRIPQ8WXE1 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.69■□□□□ 0.74
ATRIPQ8WXE1 AC007663.1-201ENST00000438948 1240 ntBASIC19.69■□□□□ 0.74
ATRIPQ8WXE1 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATRIPQ8WXE1 CKBP1-201ENST00000565489 1086 ntBASIC19.69■□□□□ 0.74
ATRIPQ8WXE1 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.69■□□□□ 0.74
ATRIPQ8WXE1 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.69■□□□□ 0.74
ATRIPQ8WXE1 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATRIPQ8WXE1 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATRIPQ8WXE1 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATRIPQ8WXE1 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.69■□□□□ 0.74
ATRIPQ8WXE1 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATRIPQ8WXE1 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATRIPQ8WXE1 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
ATRIPQ8WXE1 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATRIPQ8WXE1 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms