Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.52■□□□□ 0.56
SH3RF2Q8TEC5 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.52■□□□□ 0.56
SH3RF2Q8TEC5 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.52■□□□□ 0.56
SH3RF2Q8TEC5 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.52■□□□□ 0.56
SH3RF2Q8TEC5 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SH3RF2Q8TEC5 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.52■□□□□ 0.55
SH3RF2Q8TEC5 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SH3RF2Q8TEC5 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.52■□□□□ 0.55
SH3RF2Q8TEC5 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SH3RF2Q8TEC5 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.51■□□□□ 0.55
SH3RF2Q8TEC5 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SH3RF2Q8TEC5 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.51■□□□□ 0.55
SH3RF2Q8TEC5 FAM220CP-201ENST00000395253 831 ntBASIC18.51■□□□□ 0.55
SH3RF2Q8TEC5 AC093909.1-201ENST00000504731 1122 ntBASIC18.51■□□□□ 0.55
SH3RF2Q8TEC5 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.51■□□□□ 0.55
SH3RF2Q8TEC5 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SH3RF2Q8TEC5 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.51■□□□□ 0.55
SH3RF2Q8TEC5 AL049840.3-201ENST00000602669 611 ntBASIC18.51■□□□□ 0.55
SH3RF2Q8TEC5 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.51■□□□□ 0.55
SH3RF2Q8TEC5 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SH3RF2Q8TEC5 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SH3RF2Q8TEC5 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SH3RF2Q8TEC5 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SH3RF2Q8TEC5 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SH3RF2Q8TEC5 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SH3RF2Q8TEC5 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.51■□□□□ 0.55
SH3RF2Q8TEC5 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.51■□□□□ 0.55
SH3RF2Q8TEC5 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SH3RF2Q8TEC5 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SH3RF2Q8TEC5 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
SH3RF2Q8TEC5 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
SH3RF2Q8TEC5 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SH3RF2Q8TEC5 AC135050.7-201ENST00000624508 2218 ntBASIC18.5■□□□□ 0.55
SH3RF2Q8TEC5 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.5■□□□□ 0.55
SH3RF2Q8TEC5 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SH3RF2Q8TEC5 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
SH3RF2Q8TEC5 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
SH3RF2Q8TEC5 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.5■□□□□ 0.55
SH3RF2Q8TEC5 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.5■□□□□ 0.55
SH3RF2Q8TEC5 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.5■□□□□ 0.55
SH3RF2Q8TEC5 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SH3RF2Q8TEC5 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SH3RF2Q8TEC5 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.5■□□□□ 0.55
SH3RF2Q8TEC5 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SH3RF2Q8TEC5 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.5■□□□□ 0.55
SH3RF2Q8TEC5 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SH3RF2Q8TEC5 AC007967.3-201ENST00000434308 558 ntBASIC18.5■□□□□ 0.55
SH3RF2Q8TEC5 HNRNPDP1-201ENST00000439535 754 ntBASIC18.5■□□□□ 0.55
SH3RF2Q8TEC5 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.5■□□□□ 0.55
SH3RF2Q8TEC5 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.5■□□□□ 0.55
SH3RF2Q8TEC5 SART3-203ENST00000546611 1184 ntBASIC18.5■□□□□ 0.55
SH3RF2Q8TEC5 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.5■□□□□ 0.55
SH3RF2Q8TEC5 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SH3RF2Q8TEC5 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SH3RF2Q8TEC5 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.5■□□□□ 0.55
SH3RF2Q8TEC5 FAM215A-202ENST00000632077 792 ntBASIC18.5■□□□□ 0.55
SH3RF2Q8TEC5 AF228730.7-201ENST00000641842 219 ntBASIC18.5■□□□□ 0.55
SH3RF2Q8TEC5 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
SH3RF2Q8TEC5 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SH3RF2Q8TEC5 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.5■□□□□ 0.55
SH3RF2Q8TEC5 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SH3RF2Q8TEC5 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SH3RF2Q8TEC5 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SH3RF2Q8TEC5 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SH3RF2Q8TEC5 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SH3RF2Q8TEC5 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SH3RF2Q8TEC5 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SH3RF2Q8TEC5 BICD1-207ENST00000551848 1962 ntBASIC18.5■□□□□ 0.55
SH3RF2Q8TEC5 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SH3RF2Q8TEC5 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SH3RF2Q8TEC5 AC097374.2-201ENST00000618617 1306 ntBASIC18.49■□□□□ 0.55
SH3RF2Q8TEC5 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.49■□□□□ 0.55
SH3RF2Q8TEC5 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SH3RF2Q8TEC5 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SH3RF2Q8TEC5 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SH3RF2Q8TEC5 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
SH3RF2Q8TEC5 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SH3RF2Q8TEC5 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SH3RF2Q8TEC5 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
SH3RF2Q8TEC5 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
SH3RF2Q8TEC5 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
SH3RF2Q8TEC5 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
SH3RF2Q8TEC5 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SH3RF2Q8TEC5 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.49■□□□□ 0.55
SH3RF2Q8TEC5 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.49■□□□□ 0.55
SH3RF2Q8TEC5 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.49■□□□□ 0.55
SH3RF2Q8TEC5 SLC25A1P1-201ENST00000528351 927 ntBASIC18.49■□□□□ 0.55
SH3RF2Q8TEC5 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SH3RF2Q8TEC5 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.49■□□□□ 0.55
SH3RF2Q8TEC5 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.49■□□□□ 0.55
SH3RF2Q8TEC5 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SH3RF2Q8TEC5 MIR7706-201ENST00000613747 67 ntBASIC18.49■□□□□ 0.55
SH3RF2Q8TEC5 AC243591.1-201ENST00000452967 1364 ntBASIC18.49■□□□□ 0.55
SH3RF2Q8TEC5 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SH3RF2Q8TEC5 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SH3RF2Q8TEC5 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.49■□□□□ 0.55
SH3RF2Q8TEC5 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SH3RF2Q8TEC5 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SH3RF2Q8TEC5 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SH3RF2Q8TEC5 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms