Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CCHCR1Q8TD31 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCHCR1Q8TD31 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCHCR1Q8TD31 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCHCR1Q8TD31 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCHCR1Q8TD31 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCHCR1Q8TD31 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.65■□□□□ 0.58
CCHCR1Q8TD31 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.65■□□□□ 0.58
CCHCR1Q8TD31 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.65■□□□□ 0.58
CCHCR1Q8TD31 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.65■□□□□ 0.58
CCHCR1Q8TD31 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.65■□□□□ 0.58
CCHCR1Q8TD31 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.65■□□□□ 0.58
CCHCR1Q8TD31 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.65■□□□□ 0.58
CCHCR1Q8TD31 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.65■□□□□ 0.58
CCHCR1Q8TD31 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.65■□□□□ 0.58
CCHCR1Q8TD31 AC112497.1-201ENST00000624824 639 ntBASIC18.65■□□□□ 0.58
CCHCR1Q8TD31 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCHCR1Q8TD31 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCHCR1Q8TD31 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.65■□□□□ 0.58
CCHCR1Q8TD31 AL645608.8-201ENST00000606034 2086 ntBASIC18.65■□□□□ 0.58
CCHCR1Q8TD31 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCHCR1Q8TD31 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCHCR1Q8TD31 AC099343.3-201ENST00000605834 2503 ntBASIC18.65■□□□□ 0.58
CCHCR1Q8TD31 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCHCR1Q8TD31 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCHCR1Q8TD31 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCHCR1Q8TD31 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.65■□□□□ 0.58
CCHCR1Q8TD31 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCHCR1Q8TD31 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCHCR1Q8TD31 AL024508.2-201ENST00000607749 1894 ntBASIC18.65■□□□□ 0.58
CCHCR1Q8TD31 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCHCR1Q8TD31 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCHCR1Q8TD31 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCHCR1Q8TD31 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
CCHCR1Q8TD31 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CCHCR1Q8TD31 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
CCHCR1Q8TD31 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.64■□□□□ 0.58
CCHCR1Q8TD31 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCHCR1Q8TD31 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCHCR1Q8TD31 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCHCR1Q8TD31 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCHCR1Q8TD31 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.64■□□□□ 0.57
CCHCR1Q8TD31 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCHCR1Q8TD31 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.64■□□□□ 0.57
CCHCR1Q8TD31 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CCHCR1Q8TD31 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.64■□□□□ 0.57
CCHCR1Q8TD31 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.64■□□□□ 0.57
CCHCR1Q8TD31 RCN1P1-201ENST00000400413 996 ntBASIC18.64■□□□□ 0.57
CCHCR1Q8TD31 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCHCR1Q8TD31 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.64■□□□□ 0.57
CCHCR1Q8TD31 COX11P1-201ENST00000489116 835 ntBASIC18.64■□□□□ 0.57
CCHCR1Q8TD31 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.64■□□□□ 0.57
CCHCR1Q8TD31 KRT18P21-201ENST00000515767 1272 ntBASIC18.64■□□□□ 0.57
CCHCR1Q8TD31 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
CCHCR1Q8TD31 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.64■□□□□ 0.57
CCHCR1Q8TD31 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
CCHCR1Q8TD31 AC008687.5-201ENST00000593746 558 ntBASIC18.64■□□□□ 0.57
CCHCR1Q8TD31 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CCHCR1Q8TD31 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.64■□□□□ 0.57
CCHCR1Q8TD31 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCHCR1Q8TD31 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCHCR1Q8TD31 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
CCHCR1Q8TD31 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCHCR1Q8TD31 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCHCR1Q8TD31 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCHCR1Q8TD31 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCHCR1Q8TD31 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCHCR1Q8TD31 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCHCR1Q8TD31 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CCHCR1Q8TD31 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCHCR1Q8TD31 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CCHCR1Q8TD31 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCHCR1Q8TD31 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCHCR1Q8TD31 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCHCR1Q8TD31 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCHCR1Q8TD31 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCHCR1Q8TD31 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CCHCR1Q8TD31 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.63■□□□□ 0.57
CCHCR1Q8TD31 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.63■□□□□ 0.57
CCHCR1Q8TD31 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CCHCR1Q8TD31 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCHCR1Q8TD31 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CCHCR1Q8TD31 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.63■□□□□ 0.57
CCHCR1Q8TD31 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CCHCR1Q8TD31 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCHCR1Q8TD31 TMPOP1-202ENST00000424642 1267 ntBASIC18.63■□□□□ 0.57
CCHCR1Q8TD31 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.63■□□□□ 0.57
CCHCR1Q8TD31 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.63■□□□□ 0.57
CCHCR1Q8TD31 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.63■□□□□ 0.57
CCHCR1Q8TD31 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.63■□□□□ 0.57
CCHCR1Q8TD31 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCHCR1Q8TD31 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCHCR1Q8TD31 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCHCR1Q8TD31 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CCHCR1Q8TD31 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CCHCR1Q8TD31 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
CCHCR1Q8TD31 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CCHCR1Q8TD31 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCHCR1Q8TD31 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCHCR1Q8TD31 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms