Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CFAP61Q8NHU2 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CFAP61Q8NHU2 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CFAP61Q8NHU2 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.14■□□□□ 0.49
CFAP61Q8NHU2 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CFAP61Q8NHU2 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CFAP61Q8NHU2 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CFAP61Q8NHU2 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CFAP61Q8NHU2 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CFAP61Q8NHU2 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CFAP61Q8NHU2 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CFAP61Q8NHU2 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.13■□□□□ 0.49
CFAP61Q8NHU2 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CFAP61Q8NHU2 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.13■□□□□ 0.49
CFAP61Q8NHU2 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CFAP61Q8NHU2 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CFAP61Q8NHU2 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CFAP61Q8NHU2 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CFAP61Q8NHU2 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CFAP61Q8NHU2 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CFAP61Q8NHU2 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CFAP61Q8NHU2 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.13■□□□□ 0.49
CFAP61Q8NHU2 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.13■□□□□ 0.49
CFAP61Q8NHU2 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CFAP61Q8NHU2 KRT18P21-201ENST00000515767 1272 ntBASIC18.13■□□□□ 0.49
CFAP61Q8NHU2 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CFAP61Q8NHU2 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.13■□□□□ 0.49
CFAP61Q8NHU2 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.13■□□□□ 0.49
CFAP61Q8NHU2 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.13■□□□□ 0.49
CFAP61Q8NHU2 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CFAP61Q8NHU2 AL023973.1-201ENST00000624619 620 ntBASIC18.13■□□□□ 0.49
CFAP61Q8NHU2 MYC-208ENST00000641036 567 ntBASIC18.13■□□□□ 0.49
CFAP61Q8NHU2 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.13■□□□□ 0.49
CFAP61Q8NHU2 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.13■□□□□ 0.49
CFAP61Q8NHU2 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CFAP61Q8NHU2 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CFAP61Q8NHU2 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CFAP61Q8NHU2 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CFAP61Q8NHU2 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.13■□□□□ 0.49
CFAP61Q8NHU2 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.13■□□□□ 0.49
CFAP61Q8NHU2 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CFAP61Q8NHU2 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.13■□□□□ 0.49
CFAP61Q8NHU2 MYLKP1-201ENST00000509077 1580 ntBASIC18.13■□□□□ 0.49
CFAP61Q8NHU2 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
CFAP61Q8NHU2 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CFAP61Q8NHU2 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.12■□□□□ 0.49
CFAP61Q8NHU2 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.12■□□□□ 0.49
CFAP61Q8NHU2 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CFAP61Q8NHU2 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.12■□□□□ 0.49
CFAP61Q8NHU2 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CFAP61Q8NHU2 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CFAP61Q8NHU2 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.12■□□□□ 0.49
CFAP61Q8NHU2 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.12■□□□□ 0.49
CFAP61Q8NHU2 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
CFAP61Q8NHU2 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CFAP61Q8NHU2 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CFAP61Q8NHU2 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CFAP61Q8NHU2 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CFAP61Q8NHU2 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CFAP61Q8NHU2 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CFAP61Q8NHU2 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CFAP61Q8NHU2 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CFAP61Q8NHU2 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CFAP61Q8NHU2 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.12■□□□□ 0.49
CFAP61Q8NHU2 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CFAP61Q8NHU2 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CFAP61Q8NHU2 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CFAP61Q8NHU2 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.12■□□□□ 0.49
CFAP61Q8NHU2 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.12■□□□□ 0.49
CFAP61Q8NHU2 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
CFAP61Q8NHU2 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.12■□□□□ 0.49
CFAP61Q8NHU2 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CFAP61Q8NHU2 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CFAP61Q8NHU2 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CFAP61Q8NHU2 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CFAP61Q8NHU2 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CFAP61Q8NHU2 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
CFAP61Q8NHU2 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
CFAP61Q8NHU2 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.12■□□□□ 0.49
CFAP61Q8NHU2 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CFAP61Q8NHU2 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CFAP61Q8NHU2 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CFAP61Q8NHU2 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CFAP61Q8NHU2 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CFAP61Q8NHU2 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CFAP61Q8NHU2 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.12■□□□□ 0.49
CFAP61Q8NHU2 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CFAP61Q8NHU2 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.12■□□□□ 0.49
CFAP61Q8NHU2 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CFAP61Q8NHU2 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CFAP61Q8NHU2 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CFAP61Q8NHU2 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.11■□□□□ 0.49
CFAP61Q8NHU2 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CFAP61Q8NHU2 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.11■□□□□ 0.49
CFAP61Q8NHU2 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CFAP61Q8NHU2 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CFAP61Q8NHU2 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CFAP61Q8NHU2 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
CFAP61Q8NHU2 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CFAP61Q8NHU2 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms