Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LSMEM1Q8N8F7 AC139887.4-201ENST00000607877 719 ntBASIC16.4■□□□□ 0.22
LSMEM1Q8N8F7 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
LSMEM1Q8N8F7 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.4■□□□□ 0.22
LSMEM1Q8N8F7 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LSMEM1Q8N8F7 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.4■□□□□ 0.22
LSMEM1Q8N8F7 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
LSMEM1Q8N8F7 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
LSMEM1Q8N8F7 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LSMEM1Q8N8F7 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.4■□□□□ 0.22
LSMEM1Q8N8F7 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
LSMEM1Q8N8F7 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LSMEM1Q8N8F7 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
LSMEM1Q8N8F7 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.39■□□□□ 0.21
LSMEM1Q8N8F7 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LSMEM1Q8N8F7 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
LSMEM1Q8N8F7 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.39■□□□□ 0.21
LSMEM1Q8N8F7 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
LSMEM1Q8N8F7 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
LSMEM1Q8N8F7 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LSMEM1Q8N8F7 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LSMEM1Q8N8F7 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
LSMEM1Q8N8F7 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LSMEM1Q8N8F7 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
LSMEM1Q8N8F7 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.39■□□□□ 0.21
LSMEM1Q8N8F7 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LSMEM1Q8N8F7 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LSMEM1Q8N8F7 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
LSMEM1Q8N8F7 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
LSMEM1Q8N8F7 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.39■□□□□ 0.21
LSMEM1Q8N8F7 FAM8A6P-201ENST00000407496 1135 ntBASIC16.39■□□□□ 0.21
LSMEM1Q8N8F7 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LSMEM1Q8N8F7 AC117947.1-201ENST00000427448 529 ntBASIC16.39■□□□□ 0.21
LSMEM1Q8N8F7 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.39■□□□□ 0.21
LSMEM1Q8N8F7 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LSMEM1Q8N8F7 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.39■□□□□ 0.21
LSMEM1Q8N8F7 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
LSMEM1Q8N8F7 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LSMEM1Q8N8F7 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.39■□□□□ 0.21
LSMEM1Q8N8F7 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
LSMEM1Q8N8F7 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LSMEM1Q8N8F7 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LSMEM1Q8N8F7 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
LSMEM1Q8N8F7 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LSMEM1Q8N8F7 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.39■□□□□ 0.21
LSMEM1Q8N8F7 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LSMEM1Q8N8F7 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LSMEM1Q8N8F7 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.38■□□□□ 0.21
LSMEM1Q8N8F7 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
LSMEM1Q8N8F7 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
LSMEM1Q8N8F7 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
LSMEM1Q8N8F7 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSMEM1Q8N8F7 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.38■□□□□ 0.21
LSMEM1Q8N8F7 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSMEM1Q8N8F7 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSMEM1Q8N8F7 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LSMEM1Q8N8F7 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSMEM1Q8N8F7 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSMEM1Q8N8F7 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LSMEM1Q8N8F7 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSMEM1Q8N8F7 AC005521.1-201ENST00000393351 872 ntBASIC16.38■□□□□ 0.21
LSMEM1Q8N8F7 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSMEM1Q8N8F7 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
LSMEM1Q8N8F7 KRT18P48-201ENST00000434763 852 ntBASIC16.38■□□□□ 0.21
LSMEM1Q8N8F7 HOMER2P1-201ENST00000455653 964 ntBASIC16.38■□□□□ 0.21
LSMEM1Q8N8F7 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.38■□□□□ 0.21
LSMEM1Q8N8F7 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.38■□□□□ 0.21
LSMEM1Q8N8F7 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.38■□□□□ 0.21
LSMEM1Q8N8F7 AC116407.2-201ENST00000613639 860 ntBASIC16.38■□□□□ 0.21
LSMEM1Q8N8F7 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LSMEM1Q8N8F7 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSMEM1Q8N8F7 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
LSMEM1Q8N8F7 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSMEM1Q8N8F7 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LSMEM1Q8N8F7 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.38■□□□□ 0.21
LSMEM1Q8N8F7 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
LSMEM1Q8N8F7 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.38■□□□□ 0.21
LSMEM1Q8N8F7 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
LSMEM1Q8N8F7 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LSMEM1Q8N8F7 AC018695.7-201ENST00000624587 2492 ntBASIC16.38■□□□□ 0.21
LSMEM1Q8N8F7 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSMEM1Q8N8F7 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LSMEM1Q8N8F7 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSMEM1Q8N8F7 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.37■□□□□ 0.21
LSMEM1Q8N8F7 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.37■□□□□ 0.21
LSMEM1Q8N8F7 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.37■□□□□ 0.21
LSMEM1Q8N8F7 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
LSMEM1Q8N8F7 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
LSMEM1Q8N8F7 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.37■□□□□ 0.21
LSMEM1Q8N8F7 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LSMEM1Q8N8F7 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LSMEM1Q8N8F7 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LSMEM1Q8N8F7 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LSMEM1Q8N8F7 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LSMEM1Q8N8F7 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
LSMEM1Q8N8F7 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LSMEM1Q8N8F7 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.37■□□□□ 0.21
LSMEM1Q8N8F7 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.37■□□□□ 0.21
LSMEM1Q8N8F7 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LSMEM1Q8N8F7 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms