Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 AC135050.7-201ENST00000624508 2218 ntBASIC14.9□□□□□ -0.02
C11orf42Q8N5U0 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
C11orf42Q8N5U0 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
C11orf42Q8N5U0 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
C11orf42Q8N5U0 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
C11orf42Q8N5U0 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
C11orf42Q8N5U0 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC14.9□□□□□ -0.02
C11orf42Q8N5U0 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
C11orf42Q8N5U0 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
C11orf42Q8N5U0 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
C11orf42Q8N5U0 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC14.9□□□□□ -0.02
C11orf42Q8N5U0 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
C11orf42Q8N5U0 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
C11orf42Q8N5U0 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
C11orf42Q8N5U0 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
C11orf42Q8N5U0 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
C11orf42Q8N5U0 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC14.9□□□□□ -0.02
C11orf42Q8N5U0 KIRREL3-AS3-201ENST00000404882 831 ntBASIC14.9□□□□□ -0.02
C11orf42Q8N5U0 COPS8-203ENST00000409334 794 ntTSL 5 BASIC14.9□□□□□ -0.02
C11orf42Q8N5U0 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC14.9□□□□□ -0.02
C11orf42Q8N5U0 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
C11orf42Q8N5U0 PPOX-214ENST00000535223 664 ntTSL 3 BASIC14.9□□□□□ -0.02
C11orf42Q8N5U0 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC14.9□□□□□ -0.02
C11orf42Q8N5U0 AC011498.5-201ENST00000592027 486 ntBASIC14.9□□□□□ -0.02
C11orf42Q8N5U0 DBP-204ENST00000599385 709 ntTSL 3 BASIC14.9□□□□□ -0.02
C11orf42Q8N5U0 AL390719.2-201ENST00000606993 987 ntBASIC14.9□□□□□ -0.02
C11orf42Q8N5U0 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
C11orf42Q8N5U0 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
C11orf42Q8N5U0 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
C11orf42Q8N5U0 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
C11orf42Q8N5U0 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
C11orf42Q8N5U0 LINC00167-201ENST00000530583 1419 ntBASIC14.9□□□□□ -0.02
C11orf42Q8N5U0 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
C11orf42Q8N5U0 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.9□□□□□ -0.02
C11orf42Q8N5U0 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
C11orf42Q8N5U0 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
C11orf42Q8N5U0 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
C11orf42Q8N5U0 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
C11orf42Q8N5U0 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
C11orf42Q8N5U0 SP100-208ENST00000427101 1922 ntTSL 2 BASIC14.9□□□□□ -0.02
C11orf42Q8N5U0 AL356309.3-201ENST00000624132 1934 ntBASIC14.9□□□□□ -0.02
C11orf42Q8N5U0 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
C11orf42Q8N5U0 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
C11orf42Q8N5U0 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
C11orf42Q8N5U0 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
C11orf42Q8N5U0 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
C11orf42Q8N5U0 AL096828.2-201ENST00000567259 1965 ntBASIC14.89□□□□□ -0.03
C11orf42Q8N5U0 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
C11orf42Q8N5U0 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.89□□□□□ -0.03
C11orf42Q8N5U0 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
C11orf42Q8N5U0 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
C11orf42Q8N5U0 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
C11orf42Q8N5U0 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
C11orf42Q8N5U0 AC093010.1-201ENST00000473625 1624 ntBASIC14.89□□□□□ -0.03
C11orf42Q8N5U0 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
C11orf42Q8N5U0 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC14.89□□□□□ -0.03
C11orf42Q8N5U0 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC14.89□□□□□ -0.03
C11orf42Q8N5U0 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
C11orf42Q8N5U0 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC14.89□□□□□ -0.03
C11orf42Q8N5U0 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
C11orf42Q8N5U0 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
C11orf42Q8N5U0 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC14.89□□□□□ -0.03
C11orf42Q8N5U0 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC14.89□□□□□ -0.03
C11orf42Q8N5U0 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC14.89□□□□□ -0.03
C11orf42Q8N5U0 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC14.89□□□□□ -0.03
C11orf42Q8N5U0 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC14.89□□□□□ -0.03
C11orf42Q8N5U0 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC14.89□□□□□ -0.03
C11orf42Q8N5U0 GPR32P1-201ENST00000601788 811 ntBASIC14.89□□□□□ -0.03
C11orf42Q8N5U0 GXYLT1P4-201ENST00000613576 1192 ntBASIC14.89□□□□□ -0.03
C11orf42Q8N5U0 AC004263.2-201ENST00000617183 678 ntBASIC14.89□□□□□ -0.03
C11orf42Q8N5U0 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC14.89□□□□□ -0.03
C11orf42Q8N5U0 AP000550.4-202ENST00000639755 178 ntBASIC14.89□□□□□ -0.03
C11orf42Q8N5U0 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
C11orf42Q8N5U0 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
C11orf42Q8N5U0 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
C11orf42Q8N5U0 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
C11orf42Q8N5U0 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC14.89□□□□□ -0.03
C11orf42Q8N5U0 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
C11orf42Q8N5U0 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
C11orf42Q8N5U0 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
C11orf42Q8N5U0 AC132938.6-201ENST00000623828 1655 ntBASIC14.89□□□□□ -0.03
C11orf42Q8N5U0 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
C11orf42Q8N5U0 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
C11orf42Q8N5U0 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
C11orf42Q8N5U0 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
C11orf42Q8N5U0 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
C11orf42Q8N5U0 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
C11orf42Q8N5U0 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC14.89□□□□□ -0.03
C11orf42Q8N5U0 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
C11orf42Q8N5U0 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
C11orf42Q8N5U0 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC14.89□□□□□ -0.03
C11orf42Q8N5U0 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
C11orf42Q8N5U0 FLYWCH1P1-201ENST00000460917 1874 ntBASIC14.89□□□□□ -0.03
C11orf42Q8N5U0 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
C11orf42Q8N5U0 Z83836.1-201ENST00000624605 1642 ntBASIC14.88□□□□□ -0.03
C11orf42Q8N5U0 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
C11orf42Q8N5U0 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
C11orf42Q8N5U0 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
C11orf42Q8N5U0 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
C11orf42Q8N5U0 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms