Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 UBE2SP1-201ENST00000450587 669 ntBASIC12.02□□□□□ -0.49
LINC01561Q8N1V8 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC12.02□□□□□ -0.49
LINC01561Q8N1V8 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC01561Q8N1V8 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC12.02□□□□□ -0.49
LINC01561Q8N1V8 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC12.02□□□□□ -0.49
LINC01561Q8N1V8 AC233702.5-201ENST00000584107 538 ntBASIC12.02□□□□□ -0.49
LINC01561Q8N1V8 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC12.02□□□□□ -0.49
LINC01561Q8N1V8 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC12.02□□□□□ -0.49
LINC01561Q8N1V8 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC01561Q8N1V8 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC01561Q8N1V8 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC01561Q8N1V8 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC01561Q8N1V8 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC01561Q8N1V8 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
LINC01561Q8N1V8 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
LINC01561Q8N1V8 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC01561Q8N1V8 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
LINC01561Q8N1V8 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
LINC01561Q8N1V8 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC01561Q8N1V8 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC01561Q8N1V8 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC01561Q8N1V8 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC01561Q8N1V8 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC01561Q8N1V8 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC01561Q8N1V8 AL162727.3-201ENST00000635661 2787 ntBASIC12.01□□□□□ -0.49
LINC01561Q8N1V8 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01561Q8N1V8 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01561Q8N1V8 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC12.01□□□□□ -0.49
LINC01561Q8N1V8 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC12.01□□□□□ -0.49
LINC01561Q8N1V8 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
LINC01561Q8N1V8 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01561Q8N1V8 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01561Q8N1V8 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01561Q8N1V8 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01561Q8N1V8 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC12.01□□□□□ -0.49
LINC01561Q8N1V8 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC12.01□□□□□ -0.49
LINC01561Q8N1V8 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01561Q8N1V8 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01561Q8N1V8 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC12.01□□□□□ -0.49
LINC01561Q8N1V8 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01561Q8N1V8 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC12.01□□□□□ -0.49
LINC01561Q8N1V8 PP12613-201ENST00000424958 2230 ntBASIC12.01□□□□□ -0.49
LINC01561Q8N1V8 CICP6-201ENST00000457191 2729 ntBASIC12.01□□□□□ -0.49
LINC01561Q8N1V8 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
LINC01561Q8N1V8 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01561Q8N1V8 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01561Q8N1V8 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC12.01□□□□□ -0.49
LINC01561Q8N1V8 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01561Q8N1V8 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01561Q8N1V8 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
LINC01561Q8N1V8 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC12.01□□□□□ -0.49
LINC01561Q8N1V8 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC12.01□□□□□ -0.49
LINC01561Q8N1V8 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC12.01□□□□□ -0.49
LINC01561Q8N1V8 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC12.01□□□□□ -0.49
LINC01561Q8N1V8 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC12.01□□□□□ -0.49
LINC01561Q8N1V8 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01561Q8N1V8 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
LINC01561Q8N1V8 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01561Q8N1V8 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
LINC01561Q8N1V8 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01561Q8N1V8 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC12.01□□□□□ -0.49
LINC01561Q8N1V8 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
LINC01561Q8N1V8 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01561Q8N1V8 LINC00167-201ENST00000530583 1419 ntBASIC12.01□□□□□ -0.49
LINC01561Q8N1V8 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01561Q8N1V8 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
LINC01561Q8N1V8 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC12.01□□□□□ -0.49
LINC01561Q8N1V8 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01561Q8N1V8 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01561Q8N1V8 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01561Q8N1V8 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC12.01□□□□□ -0.49
LINC01561Q8N1V8 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01561Q8N1V8 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01561Q8N1V8 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01561Q8N1V8 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01561Q8N1V8 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01561Q8N1V8 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
LINC01561Q8N1V8 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC12□□□□□ -0.49
LINC01561Q8N1V8 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
LINC01561Q8N1V8 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
LINC01561Q8N1V8 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC01561Q8N1V8 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC12□□□□□ -0.49
LINC01561Q8N1V8 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC01561Q8N1V8 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC12□□□□□ -0.49
LINC01561Q8N1V8 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC12□□□□□ -0.49
LINC01561Q8N1V8 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC12□□□□□ -0.49
LINC01561Q8N1V8 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC01561Q8N1V8 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC01561Q8N1V8 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC12□□□□□ -0.49
LINC01561Q8N1V8 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
LINC01561Q8N1V8 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC12□□□□□ -0.49
LINC01561Q8N1V8 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
LINC01561Q8N1V8 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC12□□□□□ -0.49
LINC01561Q8N1V8 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
LINC01561Q8N1V8 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
LINC01561Q8N1V8 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC12□□□□□ -0.49
LINC01561Q8N1V8 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
LINC01561Q8N1V8 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC01561Q8N1V8 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
LINC01561Q8N1V8 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms