Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
VPS52Q8N1B4 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
VPS52Q8N1B4 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
VPS52Q8N1B4 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VPS52Q8N1B4 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
VPS52Q8N1B4 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VPS52Q8N1B4 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
VPS52Q8N1B4 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
VPS52Q8N1B4 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VPS52Q8N1B4 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VPS52Q8N1B4 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.38■□□□□ 0.69
VPS52Q8N1B4 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
VPS52Q8N1B4 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
VPS52Q8N1B4 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.38■□□□□ 0.69
VPS52Q8N1B4 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
VPS52Q8N1B4 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VPS52Q8N1B4 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
VPS52Q8N1B4 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.38■□□□□ 0.69
VPS52Q8N1B4 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
VPS52Q8N1B4 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
VPS52Q8N1B4 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
VPS52Q8N1B4 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
VPS52Q8N1B4 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.38■□□□□ 0.69
VPS52Q8N1B4 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.38■□□□□ 0.69
VPS52Q8N1B4 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
VPS52Q8N1B4 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.38■□□□□ 0.69
VPS52Q8N1B4 TP73-AS1-210ENST00000637775 1455 ntBASIC19.38■□□□□ 0.69
VPS52Q8N1B4 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
VPS52Q8N1B4 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
VPS52Q8N1B4 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VPS52Q8N1B4 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VPS52Q8N1B4 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
VPS52Q8N1B4 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VPS52Q8N1B4 SDHAP2-201ENST00000455183 2001 ntBASIC19.37■□□□□ 0.69
VPS52Q8N1B4 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VPS52Q8N1B4 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.37■□□□□ 0.69
VPS52Q8N1B4 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.37■□□□□ 0.69
VPS52Q8N1B4 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VPS52Q8N1B4 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VPS52Q8N1B4 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VPS52Q8N1B4 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
VPS52Q8N1B4 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
VPS52Q8N1B4 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
VPS52Q8N1B4 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC19.37■□□□□ 0.69
VPS52Q8N1B4 PKD1P1-201ENST00000458669 6805 ntBASIC19.37■□□□□ 0.69
VPS52Q8N1B4 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VPS52Q8N1B4 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VPS52Q8N1B4 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VPS52Q8N1B4 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.37■□□□□ 0.69
VPS52Q8N1B4 MIR574-201ENST00000385209 96 ntBASIC19.37■□□□□ 0.69
VPS52Q8N1B4 PMS2P1-201ENST00000431037 1228 ntBASIC19.37■□□□□ 0.69
VPS52Q8N1B4 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.37■□□□□ 0.69
VPS52Q8N1B4 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.37■□□□□ 0.69
VPS52Q8N1B4 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.37■□□□□ 0.69
VPS52Q8N1B4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.37■□□□□ 0.69
VPS52Q8N1B4 SLC25A1P1-201ENST00000528351 927 ntBASIC19.37■□□□□ 0.69
VPS52Q8N1B4 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.37■□□□□ 0.69
VPS52Q8N1B4 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VPS52Q8N1B4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.37■□□□□ 0.69
VPS52Q8N1B4 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
VPS52Q8N1B4 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
VPS52Q8N1B4 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
VPS52Q8N1B4 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.37■□□□□ 0.69
VPS52Q8N1B4 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.37■□□□□ 0.69
VPS52Q8N1B4 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
VPS52Q8N1B4 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
VPS52Q8N1B4 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VPS52Q8N1B4 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VPS52Q8N1B4 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VPS52Q8N1B4 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VPS52Q8N1B4 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
VPS52Q8N1B4 MYLKP1-201ENST00000509077 1580 ntBASIC19.36■□□□□ 0.69
VPS52Q8N1B4 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VPS52Q8N1B4 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VPS52Q8N1B4 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VPS52Q8N1B4 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VPS52Q8N1B4 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.36■□□□□ 0.69
VPS52Q8N1B4 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
VPS52Q8N1B4 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VPS52Q8N1B4 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
VPS52Q8N1B4 AC104581.1-202ENST00000635932 2618 ntBASIC19.36■□□□□ 0.69
VPS52Q8N1B4 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VPS52Q8N1B4 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VPS52Q8N1B4 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.36■□□□□ 0.69
VPS52Q8N1B4 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VPS52Q8N1B4 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.36■□□□□ 0.69
VPS52Q8N1B4 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.36■□□□□ 0.69
VPS52Q8N1B4 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.36■□□□□ 0.69
VPS52Q8N1B4 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.36■□□□□ 0.69
VPS52Q8N1B4 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.36■□□□□ 0.69
VPS52Q8N1B4 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VPS52Q8N1B4 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.36■□□□□ 0.69
VPS52Q8N1B4 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
VPS52Q8N1B4 AL024508.2-201ENST00000607749 1894 ntBASIC19.36■□□□□ 0.69
VPS52Q8N1B4 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VPS52Q8N1B4 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VPS52Q8N1B4 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.36■□□□□ 0.69
VPS52Q8N1B4 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.36■□□□□ 0.69
VPS52Q8N1B4 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VPS52Q8N1B4 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms