Protein–RNA interactions for Protein: Q8N187

CARF, Calcium-responsive transcription factor, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARFQ8N187 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.91■□□□□ 0.3
CARFQ8N187 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CARFQ8N187 AC073592.5-201ENST00000624854 528 ntBASIC16.91■□□□□ 0.3
CARFQ8N187 FAM215A-202ENST00000632077 792 ntBASIC16.91■□□□□ 0.3
CARFQ8N187 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CARFQ8N187 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CARFQ8N187 REXO1L9P-201ENST00000604264 2108 ntBASIC16.91■□□□□ 0.3
CARFQ8N187 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CARFQ8N187 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CARFQ8N187 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.91■□□□□ 0.3
CARFQ8N187 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CARFQ8N187 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CARFQ8N187 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CARFQ8N187 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CARFQ8N187 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CARFQ8N187 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CARFQ8N187 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CARFQ8N187 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CARFQ8N187 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CARFQ8N187 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CARFQ8N187 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CARFQ8N187 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.9■□□□□ 0.3
CARFQ8N187 AL020989.1-201ENST00000422979 469 ntBASIC16.9■□□□□ 0.3
CARFQ8N187 LAGE3P1-201ENST00000425356 484 ntBASIC16.9■□□□□ 0.3
CARFQ8N187 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
CARFQ8N187 OR7E14P-202ENST00000530490 1290 ntBASIC16.9■□□□□ 0.3
CARFQ8N187 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.9■□□□□ 0.3
CARFQ8N187 AC139887.3-201ENST00000568585 713 ntBASIC16.9■□□□□ 0.3
CARFQ8N187 AC025062.2-201ENST00000605477 670 ntBASIC16.9■□□□□ 0.3
CARFQ8N187 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.9■□□□□ 0.3
CARFQ8N187 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.9■□□□□ 0.3
CARFQ8N187 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
CARFQ8N187 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CARFQ8N187 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.9■□□□□ 0.3
CARFQ8N187 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CARFQ8N187 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CARFQ8N187 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
CARFQ8N187 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.9■□□□□ 0.3
CARFQ8N187 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CARFQ8N187 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CARFQ8N187 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CARFQ8N187 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CARFQ8N187 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.89■□□□□ 0.3
CARFQ8N187 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CARFQ8N187 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CARFQ8N187 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CARFQ8N187 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.89■□□□□ 0.3
CARFQ8N187 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
CARFQ8N187 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CARFQ8N187 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.89■□□□□ 0.29
CARFQ8N187 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.89■□□□□ 0.29
CARFQ8N187 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.89■□□□□ 0.29
CARFQ8N187 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CARFQ8N187 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.89■□□□□ 0.29
CARFQ8N187 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CARFQ8N187 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CARFQ8N187 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CARFQ8N187 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.89■□□□□ 0.29
CARFQ8N187 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.89■□□□□ 0.29
CARFQ8N187 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.89■□□□□ 0.29
CARFQ8N187 AC079776.4-201ENST00000511039 504 ntBASIC16.89■□□□□ 0.29
CARFQ8N187 IGHV3-52-201ENST00000519770 353 ntBASIC16.89■□□□□ 0.29
CARFQ8N187 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CARFQ8N187 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.89■□□□□ 0.29
CARFQ8N187 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.89■□□□□ 0.29
CARFQ8N187 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.89■□□□□ 0.29
CARFQ8N187 MTDHP4-201ENST00000600287 670 ntBASIC16.89■□□□□ 0.29
CARFQ8N187 AC019129.2-201ENST00000609837 1235 ntBASIC16.89■□□□□ 0.29
CARFQ8N187 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.89■□□□□ 0.29
CARFQ8N187 AC107918.4-202ENST00000641623 219 ntBASIC16.89■□□□□ 0.29
CARFQ8N187 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CARFQ8N187 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CARFQ8N187 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.89■□□□□ 0.29
CARFQ8N187 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
CARFQ8N187 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CARFQ8N187 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CARFQ8N187 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
CARFQ8N187 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.89■□□□□ 0.29
CARFQ8N187 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CARFQ8N187 HLA-J-201ENST00000462773 1622 ntBASIC16.88■□□□□ 0.29
CARFQ8N187 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CARFQ8N187 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CARFQ8N187 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CARFQ8N187 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CARFQ8N187 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CARFQ8N187 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CARFQ8N187 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CARFQ8N187 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CARFQ8N187 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.88■□□□□ 0.29
CARFQ8N187 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CARFQ8N187 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CARFQ8N187 AL022342.1-201ENST00000400363 863 ntBASIC16.88■□□□□ 0.29
CARFQ8N187 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.88■□□□□ 0.29
CARFQ8N187 AL590627.1-203ENST00000421194 1026 ntBASIC16.88■□□□□ 0.29
CARFQ8N187 AC005104.2-201ENST00000427818 678 ntBASIC16.88■□□□□ 0.29
CARFQ8N187 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.88■□□□□ 0.29
CARFQ8N187 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.88■□□□□ 0.29
CARFQ8N187 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.88■□□□□ 0.29
CARFQ8N187 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CARFQ8N187 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms