Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CCDC170Q8IYT3 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CCDC170Q8IYT3 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC170Q8IYT3 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC170Q8IYT3 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC170Q8IYT3 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC170Q8IYT3 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC170Q8IYT3 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC170Q8IYT3 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC170Q8IYT3 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CCDC170Q8IYT3 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
CCDC170Q8IYT3 DDX43P3-201ENST00000441064 443 ntBASIC19.21■□□□□ 0.67
CCDC170Q8IYT3 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.21■□□□□ 0.67
CCDC170Q8IYT3 AC098590.1-201ENST00000468126 897 ntBASIC19.21■□□□□ 0.67
CCDC170Q8IYT3 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC170Q8IYT3 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC170Q8IYT3 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC170Q8IYT3 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC170Q8IYT3 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CCDC170Q8IYT3 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
CCDC170Q8IYT3 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC170Q8IYT3 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC170Q8IYT3 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CCDC170Q8IYT3 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC170Q8IYT3 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CCDC170Q8IYT3 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
CCDC170Q8IYT3 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC170Q8IYT3 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC170Q8IYT3 AC009949.1-201ENST00000623048 1830 ntBASIC19.21■□□□□ 0.67
CCDC170Q8IYT3 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC170Q8IYT3 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC170Q8IYT3 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CCDC170Q8IYT3 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC170Q8IYT3 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CCDC170Q8IYT3 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC170Q8IYT3 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC170Q8IYT3 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.2■□□□□ 0.66
CCDC170Q8IYT3 GCSHP5-201ENST00000443090 522 ntBASIC19.2■□□□□ 0.66
CCDC170Q8IYT3 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.2■□□□□ 0.66
CCDC170Q8IYT3 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC170Q8IYT3 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC170Q8IYT3 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC170Q8IYT3 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CCDC170Q8IYT3 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CCDC170Q8IYT3 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC170Q8IYT3 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC170Q8IYT3 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC170Q8IYT3 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC170Q8IYT3 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CCDC170Q8IYT3 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC170Q8IYT3 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC170Q8IYT3 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC170Q8IYT3 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC170Q8IYT3 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC170Q8IYT3 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CCDC170Q8IYT3 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC170Q8IYT3 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC170Q8IYT3 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC170Q8IYT3 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CCDC170Q8IYT3 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC170Q8IYT3 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC170Q8IYT3 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC170Q8IYT3 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC170Q8IYT3 AC113404.2-201ENST00000507884 177 ntBASIC19.19■□□□□ 0.66
CCDC170Q8IYT3 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
CCDC170Q8IYT3 C2orf69P3-201ENST00000565542 1120 ntBASIC19.19■□□□□ 0.66
CCDC170Q8IYT3 MIR3917-201ENST00000580971 93 ntBASIC19.19■□□□□ 0.66
CCDC170Q8IYT3 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.19■□□□□ 0.66
CCDC170Q8IYT3 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC170Q8IYT3 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC170Q8IYT3 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CCDC170Q8IYT3 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC170Q8IYT3 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC170Q8IYT3 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
CCDC170Q8IYT3 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC170Q8IYT3 PKD1P1-201ENST00000458669 6805 ntBASIC19.19■□□□□ 0.66
CCDC170Q8IYT3 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC170Q8IYT3 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC170Q8IYT3 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC170Q8IYT3 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC170Q8IYT3 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC170Q8IYT3 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC170Q8IYT3 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CCDC170Q8IYT3 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC170Q8IYT3 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC170Q8IYT3 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC170Q8IYT3 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CCDC170Q8IYT3 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC170Q8IYT3 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC170Q8IYT3 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC170Q8IYT3 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC170Q8IYT3 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC170Q8IYT3 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC170Q8IYT3 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CCDC170Q8IYT3 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CCDC170Q8IYT3 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC170Q8IYT3 TSPY14P-201ENST00000303979 915 ntBASIC19.18■□□□□ 0.66
CCDC170Q8IYT3 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC170Q8IYT3 AL158047.1-201ENST00000445918 881 ntBASIC19.18■□□□□ 0.66
CCDC170Q8IYT3 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms