Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC10.96□□□□□ -0.66
VPS13BQ7Z7G8 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
VPS13BQ7Z7G8 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC10.96□□□□□ -0.66
VPS13BQ7Z7G8 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
VPS13BQ7Z7G8 AC104581.1-202ENST00000635932 2618 ntBASIC10.96□□□□□ -0.66
VPS13BQ7Z7G8 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
VPS13BQ7Z7G8 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
VPS13BQ7Z7G8 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC10.96□□□□□ -0.66
VPS13BQ7Z7G8 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC10.96□□□□□ -0.66
VPS13BQ7Z7G8 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
VPS13BQ7Z7G8 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC10.95□□□□□ -0.66
VPS13BQ7Z7G8 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC10.95□□□□□ -0.66
VPS13BQ7Z7G8 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
VPS13BQ7Z7G8 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC10.95□□□□□ -0.66
VPS13BQ7Z7G8 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
VPS13BQ7Z7G8 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC10.95□□□□□ -0.66
VPS13BQ7Z7G8 AC023141.5-201ENST00000458585 616 ntBASIC10.95□□□□□ -0.66
VPS13BQ7Z7G8 MEIS3P1-201ENST00000495167 958 ntBASIC10.95□□□□□ -0.66
VPS13BQ7Z7G8 IGHV3-65-201ENST00000523210 341 ntBASIC10.95□□□□□ -0.66
VPS13BQ7Z7G8 MIR4745-201ENST00000577608 62 ntBASIC10.95□□□□□ -0.66
VPS13BQ7Z7G8 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
VPS13BQ7Z7G8 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC10.95□□□□□ -0.66
VPS13BQ7Z7G8 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
VPS13BQ7Z7G8 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
VPS13BQ7Z7G8 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
VPS13BQ7Z7G8 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC10.95□□□□□ -0.66
VPS13BQ7Z7G8 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
VPS13BQ7Z7G8 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
VPS13BQ7Z7G8 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
VPS13BQ7Z7G8 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC10.95□□□□□ -0.66
VPS13BQ7Z7G8 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
VPS13BQ7Z7G8 HLA-V-201ENST00000429037 534 ntBASIC10.95□□□□□ -0.66
VPS13BQ7Z7G8 MTCL1P1-201ENST00000446207 792 ntBASIC10.95□□□□□ -0.66
VPS13BQ7Z7G8 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC10.95□□□□□ -0.66
VPS13BQ7Z7G8 AC018845.2-201ENST00000568326 409 ntBASIC10.95□□□□□ -0.66
VPS13BQ7Z7G8 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC10.95□□□□□ -0.66
VPS13BQ7Z7G8 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
VPS13BQ7Z7G8 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
VPS13BQ7Z7G8 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
VPS13BQ7Z7G8 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC10.95□□□□□ -0.66
VPS13BQ7Z7G8 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
VPS13BQ7Z7G8 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
VPS13BQ7Z7G8 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC10.95□□□□□ -0.66
VPS13BQ7Z7G8 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC10.95□□□□□ -0.66
VPS13BQ7Z7G8 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC10.95□□□□□ -0.66
VPS13BQ7Z7G8 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
VPS13BQ7Z7G8 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
VPS13BQ7Z7G8 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
VPS13BQ7Z7G8 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
VPS13BQ7Z7G8 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC10.95□□□□□ -0.66
VPS13BQ7Z7G8 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC10.95□□□□□ -0.66
VPS13BQ7Z7G8 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC10.95□□□□□ -0.66
VPS13BQ7Z7G8 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
VPS13BQ7Z7G8 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
VPS13BQ7Z7G8 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC10.95□□□□□ -0.66
VPS13BQ7Z7G8 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC10.95□□□□□ -0.66
VPS13BQ7Z7G8 AC015911.4-201ENST00000588022 1070 ntBASIC10.95□□□□□ -0.66
VPS13BQ7Z7G8 MED29-202ENST00000594368 1471 ntTSL 2 BASIC10.95□□□□□ -0.66
VPS13BQ7Z7G8 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
VPS13BQ7Z7G8 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC10.95□□□□□ -0.66
VPS13BQ7Z7G8 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
VPS13BQ7Z7G8 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VPS13BQ7Z7G8 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VPS13BQ7Z7G8 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
VPS13BQ7Z7G8 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VPS13BQ7Z7G8 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
VPS13BQ7Z7G8 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC10.94□□□□□ -0.66
VPS13BQ7Z7G8 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
VPS13BQ7Z7G8 CCND1-203ENST00000536559 553 ntTSL 3 BASIC10.94□□□□□ -0.66
VPS13BQ7Z7G8 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC10.94□□□□□ -0.66
VPS13BQ7Z7G8 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VPS13BQ7Z7G8 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC10.94□□□□□ -0.66
VPS13BQ7Z7G8 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VPS13BQ7Z7G8 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VPS13BQ7Z7G8 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
VPS13BQ7Z7G8 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VPS13BQ7Z7G8 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
VPS13BQ7Z7G8 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
VPS13BQ7Z7G8 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VPS13BQ7Z7G8 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VPS13BQ7Z7G8 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VPS13BQ7Z7G8 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC10.94□□□□□ -0.66
VPS13BQ7Z7G8 HLA-DRB6-201ENST00000411500 1235 ntBASIC10.94□□□□□ -0.66
VPS13BQ7Z7G8 PRYP5-201ENST00000451909 266 ntBASIC10.94□□□□□ -0.66
VPS13BQ7Z7G8 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC10.94□□□□□ -0.66
VPS13BQ7Z7G8 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC10.94□□□□□ -0.66
VPS13BQ7Z7G8 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC10.94□□□□□ -0.66
VPS13BQ7Z7G8 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC10.94□□□□□ -0.66
VPS13BQ7Z7G8 AC100803.2-201ENST00000562459 1963 ntBASIC10.94□□□□□ -0.66
VPS13BQ7Z7G8 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC10.94□□□□□ -0.66
VPS13BQ7Z7G8 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VPS13BQ7Z7G8 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC10.94□□□□□ -0.66
VPS13BQ7Z7G8 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC10.94□□□□□ -0.66
VPS13BQ7Z7G8 AC051619.7-201ENST00000568314 623 ntBASIC10.94□□□□□ -0.66
VPS13BQ7Z7G8 AC105339.1-204ENST00000636249 355 ntBASIC10.94□□□□□ -0.66
VPS13BQ7Z7G8 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VPS13BQ7Z7G8 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
VPS13BQ7Z7G8 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC10.94□□□□□ -0.66
VPS13BQ7Z7G8 AC093503.3-201ENST00000624917 2352 ntBASIC10.94□□□□□ -0.66
VPS13BQ7Z7G8 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms