Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AL845331.1-201ENST00000424978 1190 ntBASIC17.97■□□□□ 0.47
LYSMD3Q7Z3D4 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.97■□□□□ 0.47
LYSMD3Q7Z3D4 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.97■□□□□ 0.47
LYSMD3Q7Z3D4 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.97■□□□□ 0.47
LYSMD3Q7Z3D4 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.97■□□□□ 0.47
LYSMD3Q7Z3D4 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.97■□□□□ 0.47
LYSMD3Q7Z3D4 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LYSMD3Q7Z3D4 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.97■□□□□ 0.47
LYSMD3Q7Z3D4 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LYSMD3Q7Z3D4 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LYSMD3Q7Z3D4 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LYSMD3Q7Z3D4 AC138932.1-201ENST00000534164 6830 ntBASIC17.97■□□□□ 0.47
LYSMD3Q7Z3D4 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
LYSMD3Q7Z3D4 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.97■□□□□ 0.47
LYSMD3Q7Z3D4 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LYSMD3Q7Z3D4 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LYSMD3Q7Z3D4 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.97■□□□□ 0.47
LYSMD3Q7Z3D4 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LYSMD3Q7Z3D4 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LYSMD3Q7Z3D4 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LYSMD3Q7Z3D4 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LYSMD3Q7Z3D4 KRT8P47-201ENST00000604727 1398 ntBASIC17.96■□□□□ 0.47
LYSMD3Q7Z3D4 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LYSMD3Q7Z3D4 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LYSMD3Q7Z3D4 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LYSMD3Q7Z3D4 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LYSMD3Q7Z3D4 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
LYSMD3Q7Z3D4 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
LYSMD3Q7Z3D4 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.96■□□□□ 0.47
LYSMD3Q7Z3D4 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.96■□□□□ 0.47
LYSMD3Q7Z3D4 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.96■□□□□ 0.47
LYSMD3Q7Z3D4 AC092119.3-201ENST00000612618 583 ntBASIC17.96■□□□□ 0.47
LYSMD3Q7Z3D4 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
LYSMD3Q7Z3D4 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LYSMD3Q7Z3D4 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LYSMD3Q7Z3D4 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LYSMD3Q7Z3D4 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LYSMD3Q7Z3D4 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LYSMD3Q7Z3D4 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
LYSMD3Q7Z3D4 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LYSMD3Q7Z3D4 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
LYSMD3Q7Z3D4 HCG11-201ENST00000411553 5696 ntBASIC17.96■□□□□ 0.46
LYSMD3Q7Z3D4 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.96■□□□□ 0.46
LYSMD3Q7Z3D4 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LYSMD3Q7Z3D4 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
LYSMD3Q7Z3D4 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LYSMD3Q7Z3D4 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.95■□□□□ 0.46
LYSMD3Q7Z3D4 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LYSMD3Q7Z3D4 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LYSMD3Q7Z3D4 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
LYSMD3Q7Z3D4 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LYSMD3Q7Z3D4 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.95■□□□□ 0.46
LYSMD3Q7Z3D4 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.95■□□□□ 0.46
LYSMD3Q7Z3D4 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
LYSMD3Q7Z3D4 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.95■□□□□ 0.46
LYSMD3Q7Z3D4 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LYSMD3Q7Z3D4 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
LYSMD3Q7Z3D4 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LYSMD3Q7Z3D4 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LYSMD3Q7Z3D4 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
LYSMD3Q7Z3D4 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LYSMD3Q7Z3D4 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LYSMD3Q7Z3D4 ATP5G2P1-201ENST00000433580 426 ntBASIC17.95■□□□□ 0.46
LYSMD3Q7Z3D4 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.95■□□□□ 0.46
LYSMD3Q7Z3D4 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.95■□□□□ 0.46
LYSMD3Q7Z3D4 TPSP2-201ENST00000561760 610 ntBASIC17.95■□□□□ 0.46
LYSMD3Q7Z3D4 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LYSMD3Q7Z3D4 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
LYSMD3Q7Z3D4 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.95■□□□□ 0.46
LYSMD3Q7Z3D4 MIR3180-1-201ENST00000580374 94 ntBASIC17.95■□□□□ 0.46
LYSMD3Q7Z3D4 MIR3180-3-201ENST00000584616 94 ntBASIC17.95■□□□□ 0.46
LYSMD3Q7Z3D4 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.95■□□□□ 0.46
LYSMD3Q7Z3D4 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LYSMD3Q7Z3D4 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LYSMD3Q7Z3D4 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
LYSMD3Q7Z3D4 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LYSMD3Q7Z3D4 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.95■□□□□ 0.46
LYSMD3Q7Z3D4 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LYSMD3Q7Z3D4 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LYSMD3Q7Z3D4 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LYSMD3Q7Z3D4 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LYSMD3Q7Z3D4 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LYSMD3Q7Z3D4 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LYSMD3Q7Z3D4 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LYSMD3Q7Z3D4 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LYSMD3Q7Z3D4 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LYSMD3Q7Z3D4 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LYSMD3Q7Z3D4 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LYSMD3Q7Z3D4 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LYSMD3Q7Z3D4 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LYSMD3Q7Z3D4 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LYSMD3Q7Z3D4 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LYSMD3Q7Z3D4 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LYSMD3Q7Z3D4 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.94■□□□□ 0.46
LYSMD3Q7Z3D4 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LYSMD3Q7Z3D4 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
LYSMD3Q7Z3D4 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LYSMD3Q7Z3D4 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.94■□□□□ 0.46
LYSMD3Q7Z3D4 KRT18P55-202ENST00000578578 1546 ntBASIC17.94■□□□□ 0.46
LYSMD3Q7Z3D4 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms