Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTCHD4Q6ZW05 AC036111.1-201ENST00000533973 1582 ntBASIC16.49■□□□□ 0.23
PTCHD4Q6ZW05 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.49■□□□□ 0.23
PTCHD4Q6ZW05 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTCHD4Q6ZW05 AP003071.4-201ENST00000562276 1284 ntBASIC16.49■□□□□ 0.23
PTCHD4Q6ZW05 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.49■□□□□ 0.23
PTCHD4Q6ZW05 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.49■□□□□ 0.23
PTCHD4Q6ZW05 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.49■□□□□ 0.23
PTCHD4Q6ZW05 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.49■□□□□ 0.23
PTCHD4Q6ZW05 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.49■□□□□ 0.23
PTCHD4Q6ZW05 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PTCHD4Q6ZW05 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTCHD4Q6ZW05 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PTCHD4Q6ZW05 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTCHD4Q6ZW05 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTCHD4Q6ZW05 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTCHD4Q6ZW05 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
PTCHD4Q6ZW05 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTCHD4Q6ZW05 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTCHD4Q6ZW05 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PTCHD4Q6ZW05 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.48■□□□□ 0.23
PTCHD4Q6ZW05 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTCHD4Q6ZW05 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTCHD4Q6ZW05 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTCHD4Q6ZW05 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTCHD4Q6ZW05 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.48■□□□□ 0.23
PTCHD4Q6ZW05 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
PTCHD4Q6ZW05 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTCHD4Q6ZW05 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTCHD4Q6ZW05 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTCHD4Q6ZW05 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PTCHD4Q6ZW05 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTCHD4Q6ZW05 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTCHD4Q6ZW05 MIR149-201ENST00000384879 89 ntBASIC16.48■□□□□ 0.23
PTCHD4Q6ZW05 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTCHD4Q6ZW05 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.48■□□□□ 0.23
PTCHD4Q6ZW05 AP005242.2-201ENST00000580065 1175 ntBASIC16.48■□□□□ 0.23
PTCHD4Q6ZW05 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.48■□□□□ 0.23
PTCHD4Q6ZW05 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.48■□□□□ 0.23
PTCHD4Q6ZW05 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.48■□□□□ 0.23
PTCHD4Q6ZW05 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTCHD4Q6ZW05 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
PTCHD4Q6ZW05 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.48■□□□□ 0.23
PTCHD4Q6ZW05 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTCHD4Q6ZW05 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTCHD4Q6ZW05 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTCHD4Q6ZW05 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTCHD4Q6ZW05 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTCHD4Q6ZW05 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PTCHD4Q6ZW05 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PTCHD4Q6ZW05 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PTCHD4Q6ZW05 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.47■□□□□ 0.23
PTCHD4Q6ZW05 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
PTCHD4Q6ZW05 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTCHD4Q6ZW05 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PTCHD4Q6ZW05 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.47■□□□□ 0.23
PTCHD4Q6ZW05 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PTCHD4Q6ZW05 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTCHD4Q6ZW05 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.47■□□□□ 0.23
PTCHD4Q6ZW05 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.47■□□□□ 0.23
PTCHD4Q6ZW05 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PTCHD4Q6ZW05 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PTCHD4Q6ZW05 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTCHD4Q6ZW05 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTCHD4Q6ZW05 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.47■□□□□ 0.23
PTCHD4Q6ZW05 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.47■□□□□ 0.23
PTCHD4Q6ZW05 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PTCHD4Q6ZW05 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.47■□□□□ 0.23
PTCHD4Q6ZW05 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.47■□□□□ 0.23
PTCHD4Q6ZW05 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTCHD4Q6ZW05 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PTCHD4Q6ZW05 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTCHD4Q6ZW05 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.47■□□□□ 0.23
PTCHD4Q6ZW05 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTCHD4Q6ZW05 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PTCHD4Q6ZW05 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PTCHD4Q6ZW05 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTCHD4Q6ZW05 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTCHD4Q6ZW05 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTCHD4Q6ZW05 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTCHD4Q6ZW05 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.47■□□□□ 0.23
PTCHD4Q6ZW05 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.47■□□□□ 0.23
PTCHD4Q6ZW05 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
PTCHD4Q6ZW05 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTCHD4Q6ZW05 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
PTCHD4Q6ZW05 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.46■□□□□ 0.23
PTCHD4Q6ZW05 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PTCHD4Q6ZW05 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
PTCHD4Q6ZW05 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.46■□□□□ 0.23
PTCHD4Q6ZW05 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTCHD4Q6ZW05 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.46■□□□□ 0.23
PTCHD4Q6ZW05 RBM17P1-201ENST00000453646 1190 ntBASIC16.46■□□□□ 0.23
PTCHD4Q6ZW05 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.46■□□□□ 0.23
PTCHD4Q6ZW05 AL023803.3-201ENST00000615559 522 ntBASIC16.46■□□□□ 0.23
PTCHD4Q6ZW05 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.46■□□□□ 0.23
PTCHD4Q6ZW05 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.46■□□□□ 0.23
PTCHD4Q6ZW05 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTCHD4Q6ZW05 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PTCHD4Q6ZW05 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTCHD4Q6ZW05 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms