Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
NIPAL3Q6P499 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
NIPAL3Q6P499 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.3■□□□□ 0.2
NIPAL3Q6P499 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NIPAL3Q6P499 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NIPAL3Q6P499 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NIPAL3Q6P499 AC141586.5-201ENST00000624546 2050 ntBASIC16.3■□□□□ 0.2
NIPAL3Q6P499 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NIPAL3Q6P499 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NIPAL3Q6P499 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
NIPAL3Q6P499 FAM210CP-201ENST00000445714 574 ntBASIC16.3■□□□□ 0.2
NIPAL3Q6P499 AL359075.1-203ENST00000462729 1002 ntBASIC16.3■□□□□ 0.2
NIPAL3Q6P499 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NIPAL3Q6P499 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.3■□□□□ 0.2
NIPAL3Q6P499 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
NIPAL3Q6P499 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
NIPAL3Q6P499 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NIPAL3Q6P499 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NIPAL3Q6P499 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.3■□□□□ 0.2
NIPAL3Q6P499 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NIPAL3Q6P499 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.3■□□□□ 0.2
NIPAL3Q6P499 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NIPAL3Q6P499 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
NIPAL3Q6P499 LINC01126-201ENST00000623515 1646 ntBASIC16.3■□□□□ 0.2
NIPAL3Q6P499 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NIPAL3Q6P499 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
NIPAL3Q6P499 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NIPAL3Q6P499 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
NIPAL3Q6P499 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
NIPAL3Q6P499 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NIPAL3Q6P499 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NIPAL3Q6P499 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NIPAL3Q6P499 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NIPAL3Q6P499 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NIPAL3Q6P499 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
NIPAL3Q6P499 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
NIPAL3Q6P499 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
NIPAL3Q6P499 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NIPAL3Q6P499 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NIPAL3Q6P499 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NIPAL3Q6P499 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.29■□□□□ 0.2
NIPAL3Q6P499 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NIPAL3Q6P499 SPDYE15P-201ENST00000424157 909 ntBASIC16.29■□□□□ 0.2
NIPAL3Q6P499 HOMER2P1-201ENST00000455653 964 ntBASIC16.29■□□□□ 0.2
NIPAL3Q6P499 DUX4L26-201ENST00000489078 1255 ntBASIC16.29■□□□□ 0.2
NIPAL3Q6P499 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.29■□□□□ 0.2
NIPAL3Q6P499 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
NIPAL3Q6P499 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.29■□□□□ 0.2
NIPAL3Q6P499 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.29■□□□□ 0.2
NIPAL3Q6P499 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.29■□□□□ 0.2
NIPAL3Q6P499 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NIPAL3Q6P499 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.29■□□□□ 0.2
NIPAL3Q6P499 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NIPAL3Q6P499 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
NIPAL3Q6P499 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NIPAL3Q6P499 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NIPAL3Q6P499 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NIPAL3Q6P499 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NIPAL3Q6P499 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NIPAL3Q6P499 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.29■□□□□ 0.2
NIPAL3Q6P499 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NIPAL3Q6P499 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NIPAL3Q6P499 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.29■□□□□ 0.2
NIPAL3Q6P499 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NIPAL3Q6P499 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NIPAL3Q6P499 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NIPAL3Q6P499 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.28■□□□□ 0.2
NIPAL3Q6P499 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NIPAL3Q6P499 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.28■□□□□ 0.2
NIPAL3Q6P499 AC080080.1-201ENST00000625121 2420 ntBASIC16.28■□□□□ 0.2
NIPAL3Q6P499 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NIPAL3Q6P499 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NIPAL3Q6P499 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
NIPAL3Q6P499 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NIPAL3Q6P499 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NIPAL3Q6P499 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
NIPAL3Q6P499 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
NIPAL3Q6P499 STARP1-201ENST00000397973 869 ntBASIC16.28■□□□□ 0.2
NIPAL3Q6P499 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.28■□□□□ 0.2
NIPAL3Q6P499 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NIPAL3Q6P499 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NIPAL3Q6P499 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.28■□□□□ 0.2
NIPAL3Q6P499 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.28■□□□□ 0.2
NIPAL3Q6P499 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
NIPAL3Q6P499 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NIPAL3Q6P499 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
NIPAL3Q6P499 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NIPAL3Q6P499 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.28■□□□□ 0.2
NIPAL3Q6P499 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NIPAL3Q6P499 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.28■□□□□ 0.2
NIPAL3Q6P499 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
NIPAL3Q6P499 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
NIPAL3Q6P499 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NIPAL3Q6P499 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NIPAL3Q6P499 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
NIPAL3Q6P499 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NIPAL3Q6P499 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NIPAL3Q6P499 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
NIPAL3Q6P499 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NIPAL3Q6P499 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms