Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
LRRK2Q5S007 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.39■□□□□ 0.05
LRRK2Q5S007 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC15.39■□□□□ 0.05
LRRK2Q5S007 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
LRRK2Q5S007 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRRK2Q5S007 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRRK2Q5S007 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRRK2Q5S007 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRRK2Q5S007 AL020989.1-201ENST00000422979 469 ntBASIC15.39■□□□□ 0.05
LRRK2Q5S007 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRRK2Q5S007 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.39■□□□□ 0.05
LRRK2Q5S007 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.39■□□□□ 0.05
LRRK2Q5S007 PARP8-218ENST00000513738 596 ntTSL 4 BASIC15.39■□□□□ 0.05
LRRK2Q5S007 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.39■□□□□ 0.05
LRRK2Q5S007 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRRK2Q5S007 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.39■□□□□ 0.05
LRRK2Q5S007 AD001527.2-201ENST00000622994 785 ntBASIC15.39■□□□□ 0.05
LRRK2Q5S007 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRRK2Q5S007 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LRRK2Q5S007 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC15.38■□□□□ 0.05
LRRK2Q5S007 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LRRK2Q5S007 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
LRRK2Q5S007 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRRK2Q5S007 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
LRRK2Q5S007 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LRRK2Q5S007 FO538757.1-201ENST00000623083 1397 ntBASIC15.38■□□□□ 0.05
LRRK2Q5S007 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LRRK2Q5S007 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
LRRK2Q5S007 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.38■□□□□ 0.05
LRRK2Q5S007 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.38■□□□□ 0.05
LRRK2Q5S007 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.38■□□□□ 0.05
LRRK2Q5S007 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LRRK2Q5S007 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
LRRK2Q5S007 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
LRRK2Q5S007 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC15.38■□□□□ 0.05
LRRK2Q5S007 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LRRK2Q5S007 AC008677.1-201ENST00000519230 1561 ntBASIC15.38■□□□□ 0.05
LRRK2Q5S007 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
LRRK2Q5S007 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRRK2Q5S007 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRRK2Q5S007 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC15.37■□□□□ 0.05
LRRK2Q5S007 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC15.37■□□□□ 0.05
LRRK2Q5S007 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRK2Q5S007 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LRRK2Q5S007 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.37■□□□□ 0.05
LRRK2Q5S007 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRK2Q5S007 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRK2Q5S007 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
LRRK2Q5S007 AC125437.2-201ENST00000625180 2167 ntBASIC15.37■□□□□ 0.05
LRRK2Q5S007 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRK2Q5S007 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LRRK2Q5S007 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.37■□□□□ 0.05
LRRK2Q5S007 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
LRRK2Q5S007 AC079776.1-201ENST00000401540 1152 ntBASIC15.37■□□□□ 0.05
LRRK2Q5S007 GPS2P2-201ENST00000430745 888 ntBASIC15.37■□□□□ 0.05
LRRK2Q5S007 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.37■□□□□ 0.05
LRRK2Q5S007 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.37■□□□□ 0.05
LRRK2Q5S007 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRK2Q5S007 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.37■□□□□ 0.05
LRRK2Q5S007 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.37■□□□□ 0.05
LRRK2Q5S007 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.37■□□□□ 0.05
LRRK2Q5S007 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
LRRK2Q5S007 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRK2Q5S007 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LRRK2Q5S007 AL049757.1-201ENST00000616842 1596 ntBASIC15.37■□□□□ 0.05
LRRK2Q5S007 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC15.37■□□□□ 0.05
LRRK2Q5S007 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LRRK2Q5S007 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRK2Q5S007 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRK2Q5S007 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRK2Q5S007 SPTLC1P1-201ENST00000447199 261 ntBASIC15.37■□□□□ 0.05
LRRK2Q5S007 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRK2Q5S007 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.37■□□□□ 0.05
LRRK2Q5S007 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.37■□□□□ 0.05
LRRK2Q5S007 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.37■□□□□ 0.05
LRRK2Q5S007 AC019129.2-201ENST00000609837 1235 ntBASIC15.37■□□□□ 0.05
LRRK2Q5S007 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LRRK2Q5S007 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.37■□□□□ 0.05
LRRK2Q5S007 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
LRRK2Q5S007 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRK2Q5S007 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC15.36■□□□□ 0.05
LRRK2Q5S007 LINC01006-201ENST00000333319 2292 ntBASIC15.36■□□□□ 0.05
LRRK2Q5S007 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.36■□□□□ 0.05
LRRK2Q5S007 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.36■□□□□ 0.05
LRRK2Q5S007 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.36■□□□□ 0.05
LRRK2Q5S007 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRK2Q5S007 SIRPAP1-201ENST00000448467 1770 ntBASIC15.36■□□□□ 0.05
LRRK2Q5S007 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRK2Q5S007 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LRRK2Q5S007 MRPS18AP1-201ENST00000414458 589 ntBASIC15.36■□□□□ 0.05
LRRK2Q5S007 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.36■□□□□ 0.05
LRRK2Q5S007 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.36■□□□□ 0.05
LRRK2Q5S007 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.36■□□□□ 0.05
LRRK2Q5S007 AL033527.4-201ENST00000641026 673 ntBASIC15.36■□□□□ 0.05
LRRK2Q5S007 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
LRRK2Q5S007 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRK2Q5S007 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRK2Q5S007 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRK2Q5S007 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRK2Q5S007 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms