Protein–RNA interactions for Protein: Q5NE16

CTSL3P, Putative inactive cathepsin L-like protein CTSL3P, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL3PQ5NE16 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.61■□□□□ 0.41
CTSL3PQ5NE16 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.61■□□□□ 0.41
CTSL3PQ5NE16 AC087388.1-201ENST00000571370 1112 ntBASIC17.61■□□□□ 0.41
CTSL3PQ5NE16 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CTSL3PQ5NE16 AL592071.1-201ENST00000611956 408 ntBASIC17.61■□□□□ 0.41
CTSL3PQ5NE16 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.61■□□□□ 0.41
CTSL3PQ5NE16 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.61■□□□□ 0.41
CTSL3PQ5NE16 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CTSL3PQ5NE16 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.61■□□□□ 0.41
CTSL3PQ5NE16 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
CTSL3PQ5NE16 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.61■□□□□ 0.41
CTSL3PQ5NE16 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTSL3PQ5NE16 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
CTSL3PQ5NE16 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTSL3PQ5NE16 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CTSL3PQ5NE16 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CTSL3PQ5NE16 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.61■□□□□ 0.41
CTSL3PQ5NE16 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.61■□□□□ 0.41
CTSL3PQ5NE16 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.61■□□□□ 0.41
CTSL3PQ5NE16 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.6■□□□□ 0.41
CTSL3PQ5NE16 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CTSL3PQ5NE16 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTSL3PQ5NE16 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTSL3PQ5NE16 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CTSL3PQ5NE16 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CTSL3PQ5NE16 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CTSL3PQ5NE16 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTSL3PQ5NE16 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTSL3PQ5NE16 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTSL3PQ5NE16 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTSL3PQ5NE16 AL845331.1-201ENST00000424978 1190 ntBASIC17.6■□□□□ 0.41
CTSL3PQ5NE16 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.6■□□□□ 0.41
CTSL3PQ5NE16 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CTSL3PQ5NE16 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.6■□□□□ 0.41
CTSL3PQ5NE16 KRT8P26-201ENST00000534154 1276 ntBASIC17.6■□□□□ 0.41
CTSL3PQ5NE16 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.6■□□□□ 0.41
CTSL3PQ5NE16 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CTSL3PQ5NE16 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTSL3PQ5NE16 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTSL3PQ5NE16 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.6■□□□□ 0.41
CTSL3PQ5NE16 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTSL3PQ5NE16 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTSL3PQ5NE16 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTSL3PQ5NE16 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.6■□□□□ 0.41
CTSL3PQ5NE16 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CTSL3PQ5NE16 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CTSL3PQ5NE16 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTSL3PQ5NE16 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTSL3PQ5NE16 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTSL3PQ5NE16 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.59■□□□□ 0.41
CTSL3PQ5NE16 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.59■□□□□ 0.41
CTSL3PQ5NE16 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTSL3PQ5NE16 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CTSL3PQ5NE16 PP12613-201ENST00000424958 2230 ntBASIC17.59■□□□□ 0.41
CTSL3PQ5NE16 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CTSL3PQ5NE16 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTSL3PQ5NE16 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.59■□□□□ 0.41
CTSL3PQ5NE16 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.59■□□□□ 0.41
CTSL3PQ5NE16 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.59■□□□□ 0.41
CTSL3PQ5NE16 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTSL3PQ5NE16 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTSL3PQ5NE16 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CTSL3PQ5NE16 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CTSL3PQ5NE16 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTSL3PQ5NE16 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.59■□□□□ 0.41
CTSL3PQ5NE16 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
CTSL3PQ5NE16 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.59■□□□□ 0.41
CTSL3PQ5NE16 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.59■□□□□ 0.41
CTSL3PQ5NE16 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.59■□□□□ 0.41
CTSL3PQ5NE16 GUSBP12-201ENST00000513727 720 ntBASIC17.59■□□□□ 0.41
CTSL3PQ5NE16 AC116407.4-201ENST00000623319 1061 ntBASIC17.59■□□□□ 0.41
CTSL3PQ5NE16 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTSL3PQ5NE16 AC133963.1-201ENST00000504166 1679 ntBASIC17.58■□□□□ 0.41
CTSL3PQ5NE16 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CTSL3PQ5NE16 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.58■□□□□ 0.41
CTSL3PQ5NE16 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.58■□□□□ 0.41
CTSL3PQ5NE16 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CTSL3PQ5NE16 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
CTSL3PQ5NE16 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.58■□□□□ 0.41
CTSL3PQ5NE16 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CTSL3PQ5NE16 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
CTSL3PQ5NE16 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
CTSL3PQ5NE16 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTSL3PQ5NE16 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTSL3PQ5NE16 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CTSL3PQ5NE16 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.58■□□□□ 0.4
CTSL3PQ5NE16 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTSL3PQ5NE16 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CTSL3PQ5NE16 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.58■□□□□ 0.4
CTSL3PQ5NE16 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.58■□□□□ 0.4
CTSL3PQ5NE16 AL353801.3-201ENST00000609898 542 ntBASIC17.58■□□□□ 0.4
CTSL3PQ5NE16 AC124864.1-201ENST00000623408 392 ntBASIC17.58■□□□□ 0.4
CTSL3PQ5NE16 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTSL3PQ5NE16 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
CTSL3PQ5NE16 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.58■□□□□ 0.4
CTSL3PQ5NE16 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.58■□□□□ 0.4
CTSL3PQ5NE16 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CTSL3PQ5NE16 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.58■□□□□ 0.4
CTSL3PQ5NE16 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTSL3PQ5NE16 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms