Protein–RNA interactions for Protein: Q5JSP0

FGD3, FYVE, RhoGEF and PH domain-containing protein 3, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD3Q5JSP0 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
FGD3Q5JSP0 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
FGD3Q5JSP0 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
FGD3Q5JSP0 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
FGD3Q5JSP0 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FGD3Q5JSP0 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.82■□□□□ 0.28
FGD3Q5JSP0 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
FGD3Q5JSP0 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.82■□□□□ 0.28
FGD3Q5JSP0 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
FGD3Q5JSP0 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
FGD3Q5JSP0 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FGD3Q5JSP0 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FGD3Q5JSP0 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
FGD3Q5JSP0 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FGD3Q5JSP0 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
FGD3Q5JSP0 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FGD3Q5JSP0 AC009102.3-201ENST00000623118 1491 ntBASIC16.81■□□□□ 0.28
FGD3Q5JSP0 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
FGD3Q5JSP0 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FGD3Q5JSP0 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.81■□□□□ 0.28
FGD3Q5JSP0 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
FGD3Q5JSP0 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.81■□□□□ 0.28
FGD3Q5JSP0 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
FGD3Q5JSP0 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.81■□□□□ 0.28
FGD3Q5JSP0 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
FGD3Q5JSP0 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.81■□□□□ 0.28
FGD3Q5JSP0 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.81■□□□□ 0.28
FGD3Q5JSP0 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.81■□□□□ 0.28
FGD3Q5JSP0 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.81■□□□□ 0.28
FGD3Q5JSP0 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.81■□□□□ 0.28
FGD3Q5JSP0 CD177P1-201ENST00000606252 935 ntBASIC16.81■□□□□ 0.28
FGD3Q5JSP0 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
FGD3Q5JSP0 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FGD3Q5JSP0 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
FGD3Q5JSP0 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FGD3Q5JSP0 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FGD3Q5JSP0 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
FGD3Q5JSP0 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FGD3Q5JSP0 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
FGD3Q5JSP0 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
FGD3Q5JSP0 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
FGD3Q5JSP0 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FGD3Q5JSP0 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
FGD3Q5JSP0 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FGD3Q5JSP0 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FGD3Q5JSP0 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.8■□□□□ 0.28
FGD3Q5JSP0 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
FGD3Q5JSP0 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FGD3Q5JSP0 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FGD3Q5JSP0 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
FGD3Q5JSP0 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FGD3Q5JSP0 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.8■□□□□ 0.28
FGD3Q5JSP0 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.8■□□□□ 0.28
FGD3Q5JSP0 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
FGD3Q5JSP0 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FGD3Q5JSP0 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FGD3Q5JSP0 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FGD3Q5JSP0 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.8■□□□□ 0.28
FGD3Q5JSP0 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FGD3Q5JSP0 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
FGD3Q5JSP0 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.8■□□□□ 0.28
FGD3Q5JSP0 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.8■□□□□ 0.28
FGD3Q5JSP0 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.8■□□□□ 0.28
FGD3Q5JSP0 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
FGD3Q5JSP0 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
FGD3Q5JSP0 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.8■□□□□ 0.28
FGD3Q5JSP0 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.8■□□□□ 0.28
FGD3Q5JSP0 MIR4651-201ENST00000582622 73 ntBASIC16.8■□□□□ 0.28
FGD3Q5JSP0 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.8■□□□□ 0.28
FGD3Q5JSP0 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.8■□□□□ 0.28
FGD3Q5JSP0 DGCR10-201ENST00000609839 495 ntBASIC16.8■□□□□ 0.28
FGD3Q5JSP0 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FGD3Q5JSP0 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FGD3Q5JSP0 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FGD3Q5JSP0 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FGD3Q5JSP0 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.8■□□□□ 0.28
FGD3Q5JSP0 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
FGD3Q5JSP0 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FGD3Q5JSP0 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FGD3Q5JSP0 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.8■□□□□ 0.28
FGD3Q5JSP0 AC036111.1-201ENST00000533973 1582 ntBASIC16.8■□□□□ 0.28
FGD3Q5JSP0 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
FGD3Q5JSP0 AL163051.1-201ENST00000569214 1512 ntBASIC16.8■□□□□ 0.28
FGD3Q5JSP0 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.8■□□□□ 0.28
FGD3Q5JSP0 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
FGD3Q5JSP0 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.8■□□□□ 0.28
FGD3Q5JSP0 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FGD3Q5JSP0 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
FGD3Q5JSP0 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.79■□□□□ 0.28
FGD3Q5JSP0 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FGD3Q5JSP0 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.79■□□□□ 0.28
FGD3Q5JSP0 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.79■□□□□ 0.28
FGD3Q5JSP0 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
FGD3Q5JSP0 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FGD3Q5JSP0 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
FGD3Q5JSP0 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
FGD3Q5JSP0 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.79■□□□□ 0.28
FGD3Q5JSP0 SDHAP2-201ENST00000455183 2001 ntBASIC16.79■□□□□ 0.28
FGD3Q5JSP0 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FGD3Q5JSP0 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms