Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01554Q52M75 AC093484.2-201ENST00000580996 2166 ntBASIC9.02□□□□□ -0.97
LINC01554Q52M75 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC9.02□□□□□ -0.97
LINC01554Q52M75 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01554Q52M75 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01554Q52M75 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01554Q52M75 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01554Q52M75 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01554Q52M75 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC9.02□□□□□ -0.97
LINC01554Q52M75 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC9.02□□□□□ -0.97
LINC01554Q52M75 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01554Q52M75 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01554Q52M75 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC9.02□□□□□ -0.97
LINC01554Q52M75 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01554Q52M75 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01554Q52M75 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01554Q52M75 AC010141.2-201ENST00000452426 721 ntBASIC9.02□□□□□ -0.97
LINC01554Q52M75 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC9.02□□□□□ -0.97
LINC01554Q52M75 CDV3P1-201ENST00000471403 739 ntBASIC9.02□□□□□ -0.97
LINC01554Q52M75 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC9.02□□□□□ -0.97
LINC01554Q52M75 RHOF-204ENST00000537265 699 ntTSL 2 BASIC9.02□□□□□ -0.97
LINC01554Q52M75 TERF1P2-201ENST00000583350 1212 ntBASIC9.02□□□□□ -0.97
LINC01554Q52M75 TPRG1LP1-201ENST00000598702 760 ntBASIC9.02□□□□□ -0.97
LINC01554Q52M75 AL136967.2-201ENST00000623968 743 ntBASIC9.02□□□□□ -0.97
LINC01554Q52M75 CPT2-209ENST00000636935 803 ntTSL 5 BASIC9.02□□□□□ -0.97
LINC01554Q52M75 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01554Q52M75 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01554Q52M75 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC9.02□□□□□ -0.97
LINC01554Q52M75 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01554Q52M75 OR2I1P-210ENST00000642037 4691 ntBASIC9.02□□□□□ -0.97
LINC01554Q52M75 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01554Q52M75 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01554Q52M75 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC9.02□□□□□ -0.97
LINC01554Q52M75 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
LINC01554Q52M75 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01554Q52M75 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01554Q52M75 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01554Q52M75 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01554Q52M75 CICP20-201ENST00000443330 2801 ntBASIC9.02□□□□□ -0.97
LINC01554Q52M75 AC005252.3-201ENST00000623855 2258 ntBASIC9.02□□□□□ -0.97
LINC01554Q52M75 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
LINC01554Q52M75 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01554Q52M75 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
LINC01554Q52M75 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01554Q52M75 USP49-202ENST00000373010 2446 ntTSL 5 BASIC9.02□□□□□ -0.97
LINC01554Q52M75 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01554Q52M75 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01554Q52M75 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC9.02□□□□□ -0.97
LINC01554Q52M75 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01554Q52M75 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC9.02□□□□□ -0.97
LINC01554Q52M75 ESPNP-201ENST00000270691 2015 ntBASIC9.02□□□□□ -0.97
LINC01554Q52M75 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC9.02□□□□□ -0.97
LINC01554Q52M75 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01554Q52M75 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC9.02□□□□□ -0.97
LINC01554Q52M75 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01554Q52M75 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC9.02□□□□□ -0.97
LINC01554Q52M75 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01554Q52M75 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC9.02□□□□□ -0.97
LINC01554Q52M75 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC9.01□□□□□ -0.97
LINC01554Q52M75 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
LINC01554Q52M75 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
LINC01554Q52M75 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC9.01□□□□□ -0.97
LINC01554Q52M75 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC9.01□□□□□ -0.97
LINC01554Q52M75 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LINC01554Q52M75 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
LINC01554Q52M75 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC9.01□□□□□ -0.97
LINC01554Q52M75 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC9.01□□□□□ -0.97
LINC01554Q52M75 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC9.01□□□□□ -0.97
LINC01554Q52M75 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
LINC01554Q52M75 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC9.01□□□□□ -0.97
LINC01554Q52M75 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC9.01□□□□□ -0.97
LINC01554Q52M75 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LINC01554Q52M75 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC9.01□□□□□ -0.97
LINC01554Q52M75 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
LINC01554Q52M75 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
LINC01554Q52M75 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC9.01□□□□□ -0.97
LINC01554Q52M75 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
LINC01554Q52M75 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
LINC01554Q52M75 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
LINC01554Q52M75 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LINC01554Q52M75 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
LINC01554Q52M75 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LINC01554Q52M75 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LINC01554Q52M75 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC9.01□□□□□ -0.97
LINC01554Q52M75 COX20-201ENST00000366528 568 ntTSL 2 BASIC9.01□□□□□ -0.97
LINC01554Q52M75 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
LINC01554Q52M75 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LINC01554Q52M75 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
LINC01554Q52M75 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
LINC01554Q52M75 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LINC01554Q52M75 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC9.01□□□□□ -0.97
LINC01554Q52M75 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC9.01□□□□□ -0.97
LINC01554Q52M75 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC9.01□□□□□ -0.97
LINC01554Q52M75 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
LINC01554Q52M75 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC9.01□□□□□ -0.97
LINC01554Q52M75 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LINC01554Q52M75 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LINC01554Q52M75 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LINC01554Q52M75 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC9.01□□□□□ -0.97
LINC01554Q52M75 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms