Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
RFX7Q2KHR2 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC21.58■■□□□ 1.04
RFX7Q2KHR2 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
RFX7Q2KHR2 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
RFX7Q2KHR2 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RFX7Q2KHR2 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC21.57■■□□□ 1.04
RFX7Q2KHR2 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RFX7Q2KHR2 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RFX7Q2KHR2 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RFX7Q2KHR2 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
RFX7Q2KHR2 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RFX7Q2KHR2 AC068880.1-201ENST00000507289 2297 ntBASIC21.57■■□□□ 1.04
RFX7Q2KHR2 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RFX7Q2KHR2 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RFX7Q2KHR2 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RFX7Q2KHR2 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
RFX7Q2KHR2 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC21.57■■□□□ 1.04
RFX7Q2KHR2 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC21.57■■□□□ 1.04
RFX7Q2KHR2 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC21.57■■□□□ 1.04
RFX7Q2KHR2 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
RFX7Q2KHR2 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
RFX7Q2KHR2 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RFX7Q2KHR2 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RFX7Q2KHR2 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RFX7Q2KHR2 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RFX7Q2KHR2 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC21.56■■□□□ 1.04
RFX7Q2KHR2 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC21.56■■□□□ 1.04
RFX7Q2KHR2 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RFX7Q2KHR2 TP73-AS1-210ENST00000637775 1455 ntBASIC21.56■■□□□ 1.04
RFX7Q2KHR2 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC21.56■■□□□ 1.04
RFX7Q2KHR2 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RFX7Q2KHR2 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC21.56■■□□□ 1.04
RFX7Q2KHR2 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
RFX7Q2KHR2 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RFX7Q2KHR2 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RFX7Q2KHR2 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
RFX7Q2KHR2 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RFX7Q2KHR2 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
RFX7Q2KHR2 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RFX7Q2KHR2 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RFX7Q2KHR2 RCN1P2-201ENST00000398357 915 ntBASIC21.56■■□□□ 1.04
RFX7Q2KHR2 KRT18P67-201ENST00000432816 1264 ntBASIC21.56■■□□□ 1.04
RFX7Q2KHR2 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC21.56■■□□□ 1.04
RFX7Q2KHR2 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
RFX7Q2KHR2 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC21.56■■□□□ 1.04
RFX7Q2KHR2 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC21.56■■□□□ 1.04
RFX7Q2KHR2 AL591684.3-201ENST00000605187 298 ntBASIC21.56■■□□□ 1.04
RFX7Q2KHR2 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC21.56■■□□□ 1.04
RFX7Q2KHR2 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC21.56■■□□□ 1.04
RFX7Q2KHR2 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
RFX7Q2KHR2 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
RFX7Q2KHR2 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RFX7Q2KHR2 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
RFX7Q2KHR2 AC007613.1-201ENST00000572811 2597 ntBASIC21.56■■□□□ 1.04
RFX7Q2KHR2 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC21.56■■□□□ 1.04
RFX7Q2KHR2 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
RFX7Q2KHR2 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
RFX7Q2KHR2 AC125634.1-201ENST00000438758 1403 ntBASIC21.55■■□□□ 1.04
RFX7Q2KHR2 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFX7Q2KHR2 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFX7Q2KHR2 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC21.55■■□□□ 1.04
RFX7Q2KHR2 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFX7Q2KHR2 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RFX7Q2KHR2 AC009949.1-201ENST00000623048 1830 ntBASIC21.55■■□□□ 1.04
RFX7Q2KHR2 GNE-204ENST00000539208 2190 ntTSL 2 BASIC21.55■■□□□ 1.04
RFX7Q2KHR2 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFX7Q2KHR2 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
RFX7Q2KHR2 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RFX7Q2KHR2 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFX7Q2KHR2 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFX7Q2KHR2 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC21.55■■□□□ 1.04
RFX7Q2KHR2 FGFR3P6-201ENST00000457012 610 ntBASIC21.55■■□□□ 1.04
RFX7Q2KHR2 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC21.55■■□□□ 1.04
RFX7Q2KHR2 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC21.55■■□□□ 1.04
RFX7Q2KHR2 AC011467.2-201ENST00000598425 242 ntBASIC21.55■■□□□ 1.04
RFX7Q2KHR2 AC008608.2-201ENST00000606089 416 ntBASIC21.55■■□□□ 1.04
RFX7Q2KHR2 AP001269.4-201ENST00000609611 512 ntBASIC21.55■■□□□ 1.04
RFX7Q2KHR2 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RFX7Q2KHR2 AC023511.2-201ENST00000618803 211 ntBASIC21.55■■□□□ 1.04
RFX7Q2KHR2 AC148477.8-201ENST00000624298 468 ntBASIC21.55■■□□□ 1.04
RFX7Q2KHR2 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFX7Q2KHR2 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFX7Q2KHR2 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC21.55■■□□□ 1.04
RFX7Q2KHR2 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC21.55■■□□□ 1.04
RFX7Q2KHR2 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFX7Q2KHR2 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFX7Q2KHR2 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFX7Q2KHR2 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RFX7Q2KHR2 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.54■■□□□ 1.04
RFX7Q2KHR2 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFX7Q2KHR2 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFX7Q2KHR2 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
RFX7Q2KHR2 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC21.54■■□□□ 1.04
RFX7Q2KHR2 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC21.54■■□□□ 1.04
RFX7Q2KHR2 GZMM-202ENST00000592501 941 ntTSL 3 BASIC21.54■■□□□ 1.04
RFX7Q2KHR2 AC120114.3-201ENST00000611923 658 ntBASIC21.54■■□□□ 1.04
RFX7Q2KHR2 BX640515.1-201ENST00000617215 977 ntBASIC21.54■■□□□ 1.04
RFX7Q2KHR2 AL773604.1-201ENST00000617417 272 ntBASIC21.54■■□□□ 1.04
RFX7Q2KHR2 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC21.54■■□□□ 1.04
RFX7Q2KHR2 AC097374.2-201ENST00000618617 1306 ntBASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms