Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CACNA1EQ15878 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CACNA1EQ15878 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CACNA1EQ15878 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CACNA1EQ15878 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CACNA1EQ15878 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.3■□□□□ 0.36
CACNA1EQ15878 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CACNA1EQ15878 AC011467.4-201ENST00000594891 528 ntBASIC17.3■□□□□ 0.36
CACNA1EQ15878 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CACNA1EQ15878 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.3■□□□□ 0.36
CACNA1EQ15878 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.29■□□□□ 0.36
CACNA1EQ15878 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.29■□□□□ 0.36
CACNA1EQ15878 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CACNA1EQ15878 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CACNA1EQ15878 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.29■□□□□ 0.36
CACNA1EQ15878 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CACNA1EQ15878 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CACNA1EQ15878 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CACNA1EQ15878 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CACNA1EQ15878 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CACNA1EQ15878 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.29■□□□□ 0.36
CACNA1EQ15878 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CACNA1EQ15878 AP000344.2-201ENST00000512987 629 ntBASIC17.29■□□□□ 0.36
CACNA1EQ15878 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.29■□□□□ 0.36
CACNA1EQ15878 AC008667.4-201ENST00000607370 168 ntBASIC17.29■□□□□ 0.36
CACNA1EQ15878 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.29■□□□□ 0.36
CACNA1EQ15878 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.29■□□□□ 0.36
CACNA1EQ15878 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
CACNA1EQ15878 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
CACNA1EQ15878 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CACNA1EQ15878 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.29■□□□□ 0.36
CACNA1EQ15878 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CACNA1EQ15878 AL020989.1-201ENST00000422979 469 ntBASIC17.29■□□□□ 0.36
CACNA1EQ15878 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.29■□□□□ 0.36
CACNA1EQ15878 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CACNA1EQ15878 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.29■□□□□ 0.36
CACNA1EQ15878 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.28■□□□□ 0.36
CACNA1EQ15878 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.28■□□□□ 0.36
CACNA1EQ15878 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CACNA1EQ15878 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CACNA1EQ15878 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CACNA1EQ15878 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.28■□□□□ 0.36
CACNA1EQ15878 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CACNA1EQ15878 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CACNA1EQ15878 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.28■□□□□ 0.36
CACNA1EQ15878 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CACNA1EQ15878 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CACNA1EQ15878 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.28■□□□□ 0.36
CACNA1EQ15878 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CACNA1EQ15878 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CACNA1EQ15878 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CACNA1EQ15878 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.28■□□□□ 0.36
CACNA1EQ15878 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CACNA1EQ15878 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.28■□□□□ 0.36
CACNA1EQ15878 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.28■□□□□ 0.36
CACNA1EQ15878 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CACNA1EQ15878 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CACNA1EQ15878 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CACNA1EQ15878 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CACNA1EQ15878 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CACNA1EQ15878 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CACNA1EQ15878 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.28■□□□□ 0.36
CACNA1EQ15878 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CACNA1EQ15878 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CACNA1EQ15878 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CACNA1EQ15878 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CACNA1EQ15878 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CACNA1EQ15878 AL139400.1-201ENST00000366220 510 ntBASIC17.27■□□□□ 0.36
CACNA1EQ15878 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.27■□□□□ 0.36
CACNA1EQ15878 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CACNA1EQ15878 GPR89P-201ENST00000407924 1495 ntBASIC17.27■□□□□ 0.36
CACNA1EQ15878 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CACNA1EQ15878 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CACNA1EQ15878 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CACNA1EQ15878 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CACNA1EQ15878 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
CACNA1EQ15878 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CACNA1EQ15878 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.27■□□□□ 0.36
CACNA1EQ15878 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CACNA1EQ15878 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
CACNA1EQ15878 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CACNA1EQ15878 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.27■□□□□ 0.35
CACNA1EQ15878 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.27■□□□□ 0.35
CACNA1EQ15878 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.27■□□□□ 0.35
CACNA1EQ15878 AL513190.1-201ENST00000621254 727 ntBASIC17.27■□□□□ 0.35
CACNA1EQ15878 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CACNA1EQ15878 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.27■□□□□ 0.35
CACNA1EQ15878 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CACNA1EQ15878 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CACNA1EQ15878 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CACNA1EQ15878 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.27■□□□□ 0.35
CACNA1EQ15878 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CACNA1EQ15878 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CACNA1EQ15878 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CACNA1EQ15878 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.26■□□□□ 0.35
CACNA1EQ15878 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.26■□□□□ 0.35
CACNA1EQ15878 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.26■□□□□ 0.35
CACNA1EQ15878 AC018445.3-201ENST00000624177 1945 ntBASIC17.26■□□□□ 0.35
CACNA1EQ15878 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CACNA1EQ15878 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms