Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H1AQ02539 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H1AQ02539 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H1AQ02539 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H1AQ02539 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H1AQ02539 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H1AQ02539 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H1AQ02539 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H1AQ02539 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
HIST1H1AQ02539 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H1AQ02539 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H1AQ02539 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H1AQ02539 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC13.72□□□□□ -0.21
HIST1H1AQ02539 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC13.72□□□□□ -0.21
HIST1H1AQ02539 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC13.72□□□□□ -0.21
HIST1H1AQ02539 BX088651.1-201ENST00000540551 451 ntBASIC13.72□□□□□ -0.21
HIST1H1AQ02539 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC13.72□□□□□ -0.21
HIST1H1AQ02539 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H1AQ02539 AL353719.1-201ENST00000566847 864 ntBASIC13.72□□□□□ -0.21
HIST1H1AQ02539 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
HIST1H1AQ02539 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC13.72□□□□□ -0.21
HIST1H1AQ02539 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H1AQ02539 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
HIST1H1AQ02539 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC13.72□□□□□ -0.21
HIST1H1AQ02539 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H1AQ02539 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC13.72□□□□□ -0.21
HIST1H1AQ02539 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
HIST1H1AQ02539 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H1AQ02539 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H1AQ02539 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
HIST1H1AQ02539 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC13.72□□□□□ -0.21
HIST1H1AQ02539 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H1AQ02539 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC13.72□□□□□ -0.21
HIST1H1AQ02539 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
HIST1H1AQ02539 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H1AQ02539 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H1AQ02539 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H1AQ02539 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H1AQ02539 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
HIST1H1AQ02539 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
HIST1H1AQ02539 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST1H1AQ02539 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST1H1AQ02539 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
HIST1H1AQ02539 AC012317.2-201ENST00000623305 2251 ntBASIC13.71□□□□□ -0.21
HIST1H1AQ02539 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HIST1H1AQ02539 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST1H1AQ02539 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST1H1AQ02539 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
HIST1H1AQ02539 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST1H1AQ02539 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST1H1AQ02539 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
HIST1H1AQ02539 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST1H1AQ02539 AL163051.1-201ENST00000569214 1512 ntBASIC13.71□□□□□ -0.21
HIST1H1AQ02539 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST1H1AQ02539 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC13.71□□□□□ -0.21
HIST1H1AQ02539 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST1H1AQ02539 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST1H1AQ02539 MIR149-201ENST00000384879 89 ntBASIC13.71□□□□□ -0.21
HIST1H1AQ02539 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC13.71□□□□□ -0.21
HIST1H1AQ02539 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HIST1H1AQ02539 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC13.71□□□□□ -0.21
HIST1H1AQ02539 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST1H1AQ02539 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC13.71□□□□□ -0.21
HIST1H1AQ02539 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC13.71□□□□□ -0.21
HIST1H1AQ02539 FITM1-202ENST00000559294 800 ntBASIC13.71□□□□□ -0.21
HIST1H1AQ02539 AC009065.1-201ENST00000564055 1225 ntBASIC13.71□□□□□ -0.21
HIST1H1AQ02539 MNT-208ENST00000575394 606 ntTSL 4 BASIC13.71□□□□□ -0.21
HIST1H1AQ02539 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST1H1AQ02539 AL023803.3-201ENST00000615559 522 ntBASIC13.71□□□□□ -0.21
HIST1H1AQ02539 CR769767.2-201ENST00000622735 460 ntBASIC13.71□□□□□ -0.21
HIST1H1AQ02539 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
HIST1H1AQ02539 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
HIST1H1AQ02539 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HIST1H1AQ02539 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HIST1H1AQ02539 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HIST1H1AQ02539 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC13.71□□□□□ -0.22
HIST1H1AQ02539 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC13.71□□□□□ -0.22
HIST1H1AQ02539 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST1H1AQ02539 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
HIST1H1AQ02539 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST1H1AQ02539 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HIST1H1AQ02539 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
HIST1H1AQ02539 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HIST1H1AQ02539 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST1H1AQ02539 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HIST1H1AQ02539 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC13.7□□□□□ -0.22
HIST1H1AQ02539 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
HIST1H1AQ02539 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HIST1H1AQ02539 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST1H1AQ02539 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HIST1H1AQ02539 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST1H1AQ02539 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST1H1AQ02539 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HIST1H1AQ02539 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST1H1AQ02539 PRR31-201ENST00000371629 978 ntTSL 2 BASIC13.7□□□□□ -0.22
HIST1H1AQ02539 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
HIST1H1AQ02539 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC13.7□□□□□ -0.22
HIST1H1AQ02539 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC13.7□□□□□ -0.22
HIST1H1AQ02539 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC13.7□□□□□ -0.22
HIST1H1AQ02539 NAT14-202ENST00000587400 416 ntTSL 5 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms