Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDK3Q00526 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.56■□□□□ 0.4
CDK3Q00526 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.56■□□□□ 0.4
CDK3Q00526 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.56■□□□□ 0.4
CDK3Q00526 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.56■□□□□ 0.4
CDK3Q00526 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDK3Q00526 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.56■□□□□ 0.4
CDK3Q00526 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.56■□□□□ 0.4
CDK3Q00526 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CDK3Q00526 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.56■□□□□ 0.4
CDK3Q00526 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CDK3Q00526 AC138028.4-201ENST00000564984 1845 ntBASIC17.56■□□□□ 0.4
CDK3Q00526 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CDK3Q00526 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDK3Q00526 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDK3Q00526 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDK3Q00526 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDK3Q00526 KRT8P10-201ENST00000450021 1447 ntBASIC17.55■□□□□ 0.4
CDK3Q00526 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDK3Q00526 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDK3Q00526 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDK3Q00526 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDK3Q00526 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.55■□□□□ 0.4
CDK3Q00526 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.55■□□□□ 0.4
CDK3Q00526 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDK3Q00526 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.55■□□□□ 0.4
CDK3Q00526 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.55■□□□□ 0.4
CDK3Q00526 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDK3Q00526 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDK3Q00526 COX5BP2-201ENST00000392354 334 ntBASIC17.55■□□□□ 0.4
CDK3Q00526 RBM17P3-201ENST00000417687 1192 ntBASIC17.55■□□□□ 0.4
CDK3Q00526 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.55■□□□□ 0.4
CDK3Q00526 ABCD1P5-201ENST00000445663 754 ntBASIC17.55■□□□□ 0.4
CDK3Q00526 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.55■□□□□ 0.4
CDK3Q00526 AC122714.2-201ENST00000502787 707 ntBASIC17.55■□□□□ 0.4
CDK3Q00526 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.55■□□□□ 0.4
CDK3Q00526 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.55■□□□□ 0.4
CDK3Q00526 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDK3Q00526 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.55■□□□□ 0.4
CDK3Q00526 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDK3Q00526 AL355877.3-201ENST00000622820 899 ntBASIC17.55■□□□□ 0.4
CDK3Q00526 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CDK3Q00526 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.55■□□□□ 0.4
CDK3Q00526 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDK3Q00526 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDK3Q00526 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDK3Q00526 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.55■□□□□ 0.4
CDK3Q00526 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDK3Q00526 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.54■□□□□ 0.4
CDK3Q00526 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.54■□□□□ 0.4
CDK3Q00526 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDK3Q00526 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CDK3Q00526 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
CDK3Q00526 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDK3Q00526 AC009949.1-201ENST00000623048 1830 ntBASIC17.54■□□□□ 0.4
CDK3Q00526 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDK3Q00526 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDK3Q00526 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDK3Q00526 KRT18P55-202ENST00000578578 1546 ntBASIC17.54■□□□□ 0.4
CDK3Q00526 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.54■□□□□ 0.4
CDK3Q00526 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.54■□□□□ 0.4
CDK3Q00526 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDK3Q00526 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDK3Q00526 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.54■□□□□ 0.4
CDK3Q00526 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.54■□□□□ 0.4
CDK3Q00526 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.54■□□□□ 0.4
CDK3Q00526 AC009078.2-202ENST00000463353 338 ntBASIC17.54■□□□□ 0.4
CDK3Q00526 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.54■□□□□ 0.4
CDK3Q00526 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDK3Q00526 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.54■□□□□ 0.4
CDK3Q00526 TP73-AS1-207ENST00000624167 988 ntBASIC17.54■□□□□ 0.4
CDK3Q00526 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.54■□□□□ 0.4
CDK3Q00526 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.54■□□□□ 0.4
CDK3Q00526 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDK3Q00526 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDK3Q00526 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CDK3Q00526 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDK3Q00526 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDK3Q00526 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDK3Q00526 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.54■□□□□ 0.4
CDK3Q00526 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
CDK3Q00526 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDK3Q00526 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDK3Q00526 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CDK3Q00526 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDK3Q00526 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDK3Q00526 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.53■□□□□ 0.4
CDK3Q00526 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDK3Q00526 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDK3Q00526 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.53■□□□□ 0.4
CDK3Q00526 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDK3Q00526 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.53■□□□□ 0.4
CDK3Q00526 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDK3Q00526 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDK3Q00526 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.53■□□□□ 0.4
CDK3Q00526 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDK3Q00526 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDK3Q00526 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDK3Q00526 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDK3Q00526 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms