Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RPS4XP62701 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RPS4XP62701 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RPS4XP62701 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.16■□□□□ 0.18
RPS4XP62701 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RPS4XP62701 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.15■□□□□ 0.18
RPS4XP62701 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPS4XP62701 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RPS4XP62701 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.15■□□□□ 0.18
RPS4XP62701 AL391807.1-203ENST00000604392 2365 ntBASIC16.15■□□□□ 0.18
RPS4XP62701 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPS4XP62701 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPS4XP62701 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPS4XP62701 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPS4XP62701 AC133963.1-201ENST00000504166 1679 ntBASIC16.15■□□□□ 0.18
RPS4XP62701 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
RPS4XP62701 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPS4XP62701 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.15■□□□□ 0.18
RPS4XP62701 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RPS4XP62701 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPS4XP62701 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPS4XP62701 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPS4XP62701 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPS4XP62701 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RPS4XP62701 KRT18P65-201ENST00000439811 1286 ntBASIC16.15■□□□□ 0.18
RPS4XP62701 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RPS4XP62701 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.15■□□□□ 0.18
RPS4XP62701 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.15■□□□□ 0.18
RPS4XP62701 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.15■□□□□ 0.18
RPS4XP62701 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.15■□□□□ 0.18
RPS4XP62701 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RPS4XP62701 AL136038.4-201ENST00000603606 1261 ntBASIC16.15■□□□□ 0.18
RPS4XP62701 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.15■□□□□ 0.18
RPS4XP62701 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPS4XP62701 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.15■□□□□ 0.18
RPS4XP62701 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPS4XP62701 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.15■□□□□ 0.18
RPS4XP62701 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPS4XP62701 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPS4XP62701 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPS4XP62701 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RPS4XP62701 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.15■□□□□ 0.18
RPS4XP62701 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.15■□□□□ 0.18
RPS4XP62701 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.15■□□□□ 0.18
RPS4XP62701 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.15■□□□□ 0.18
RPS4XP62701 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
RPS4XP62701 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RPS4XP62701 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RPS4XP62701 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RPS4XP62701 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RPS4XP62701 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RPS4XP62701 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RPS4XP62701 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.14■□□□□ 0.17
RPS4XP62701 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RPS4XP62701 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.14■□□□□ 0.17
RPS4XP62701 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RPS4XP62701 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.14■□□□□ 0.17
RPS4XP62701 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.14■□□□□ 0.17
RPS4XP62701 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RPS4XP62701 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RPS4XP62701 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.14■□□□□ 0.17
RPS4XP62701 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
RPS4XP62701 HLA-F-220ENST00000434407 884 ntBASIC16.14■□□□□ 0.17
RPS4XP62701 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RPS4XP62701 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.14■□□□□ 0.17
RPS4XP62701 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.14■□□□□ 0.17
RPS4XP62701 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.14■□□□□ 0.17
RPS4XP62701 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
RPS4XP62701 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.14■□□□□ 0.17
RPS4XP62701 AC083849.1-201ENST00000615227 514 ntBASIC16.14■□□□□ 0.17
RPS4XP62701 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.14■□□□□ 0.17
RPS4XP62701 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.14■□□□□ 0.17
RPS4XP62701 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.14■□□□□ 0.17
RPS4XP62701 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
RPS4XP62701 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
RPS4XP62701 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.14■□□□□ 0.17
RPS4XP62701 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RPS4XP62701 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.14■□□□□ 0.17
RPS4XP62701 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RPS4XP62701 AC139713.2-201ENST00000641328 2723 ntBASIC16.14■□□□□ 0.17
RPS4XP62701 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.14■□□□□ 0.17
RPS4XP62701 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.14■□□□□ 0.17
RPS4XP62701 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RPS4XP62701 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RPS4XP62701 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RPS4XP62701 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RPS4XP62701 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RPS4XP62701 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
RPS4XP62701 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RPS4XP62701 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RPS4XP62701 LTB4R2-202ENST00000528054 3092 ntBASIC16.13■□□□□ 0.17
RPS4XP62701 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
RPS4XP62701 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RPS4XP62701 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.13■□□□□ 0.17
RPS4XP62701 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.13■□□□□ 0.17
RPS4XP62701 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RPS4XP62701 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.13■□□□□ 0.17
RPS4XP62701 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RPS4XP62701 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RPS4XP62701 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms