Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC12.57□□□□□ -0.4
CKS1BP61024 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CKS1BP61024 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CKS1BP61024 AL160286.2-201ENST00000567150 934 ntBASIC12.57□□□□□ -0.4
CKS1BP61024 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC12.57□□□□□ -0.4
CKS1BP61024 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC12.57□□□□□ -0.4
CKS1BP61024 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC12.57□□□□□ -0.4
CKS1BP61024 PFKL-212ENST00000628044 129 ntTSL 3 BASIC12.57□□□□□ -0.4
CKS1BP61024 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CKS1BP61024 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CKS1BP61024 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CKS1BP61024 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CKS1BP61024 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
CKS1BP61024 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CKS1BP61024 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC12.57□□□□□ -0.4
CKS1BP61024 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC12.57□□□□□ -0.4
CKS1BP61024 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC12.57□□□□□ -0.4
CKS1BP61024 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
CKS1BP61024 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CKS1BP61024 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CKS1BP61024 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CKS1BP61024 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC12.56□□□□□ -0.4
CKS1BP61024 AL162741.1-201ENST00000565563 1558 ntBASIC12.56□□□□□ -0.4
CKS1BP61024 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CKS1BP61024 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CKS1BP61024 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CKS1BP61024 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CKS1BP61024 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CKS1BP61024 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CKS1BP61024 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CKS1BP61024 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
CKS1BP61024 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CKS1BP61024 MADD-208ENST00000405573 1823 ntTSL 5 BASIC12.56□□□□□ -0.4
CKS1BP61024 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CKS1BP61024 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
CKS1BP61024 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CKS1BP61024 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CKS1BP61024 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CKS1BP61024 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CKS1BP61024 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CKS1BP61024 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CKS1BP61024 PARL-206ENST00000435888 1098 ntTSL 5 BASIC12.56□□□□□ -0.4
CKS1BP61024 CDCA4P2-201ENST00000441182 718 ntBASIC12.56□□□□□ -0.4
CKS1BP61024 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC12.56□□□□□ -0.4
CKS1BP61024 RHOD-202ENST00000532559 538 ntTSL 3 BASIC12.56□□□□□ -0.4
CKS1BP61024 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC12.56□□□□□ -0.4
CKS1BP61024 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC12.56□□□□□ -0.4
CKS1BP61024 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CKS1BP61024 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC12.56□□□□□ -0.4
CKS1BP61024 AC004264.1-201ENST00000608354 794 ntBASIC12.56□□□□□ -0.4
CKS1BP61024 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC12.56□□□□□ -0.4
CKS1BP61024 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CKS1BP61024 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CKS1BP61024 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CKS1BP61024 GATB-213ENST00000515812 1893 ntTSL 5 BASIC12.56□□□□□ -0.4
CKS1BP61024 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
CKS1BP61024 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC12.56□□□□□ -0.4
CKS1BP61024 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.56□□□□□ -0.4
CKS1BP61024 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CKS1BP61024 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CKS1BP61024 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
CKS1BP61024 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC12.56□□□□□ -0.4
CKS1BP61024 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CKS1BP61024 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CKS1BP61024 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
CKS1BP61024 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CKS1BP61024 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
CKS1BP61024 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC12.56□□□□□ -0.4
CKS1BP61024 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC12.56□□□□□ -0.4
CKS1BP61024 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CKS1BP61024 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
CKS1BP61024 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CKS1BP61024 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CKS1BP61024 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CKS1BP61024 GOLGA6L5P-202ENST00000515341 1828 ntBASIC12.55□□□□□ -0.4
CKS1BP61024 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
CKS1BP61024 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC12.55□□□□□ -0.4
CKS1BP61024 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CKS1BP61024 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC12.55□□□□□ -0.4
CKS1BP61024 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC12.55□□□□□ -0.4
CKS1BP61024 AGK-211ENST00000629555 2765 ntTSL 5 BASIC12.55□□□□□ -0.4
CKS1BP61024 AC126763.1-201ENST00000552015 2118 ntBASIC12.55□□□□□ -0.4
CKS1BP61024 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CKS1BP61024 GAS2L1P1-201ENST00000420145 1480 ntBASIC12.55□□□□□ -0.4
CKS1BP61024 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CKS1BP61024 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
CKS1BP61024 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CKS1BP61024 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
CKS1BP61024 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC12.55□□□□□ -0.4
CKS1BP61024 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC12.55□□□□□ -0.4
CKS1BP61024 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC12.55□□□□□ -0.4
CKS1BP61024 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CKS1BP61024 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC12.55□□□□□ -0.4
CKS1BP61024 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC12.55□□□□□ -0.4
CKS1BP61024 SOX15-203ENST00000570788 1093 ntBASIC12.55□□□□□ -0.4
CKS1BP61024 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
CKS1BP61024 AC008687.6-201ENST00000596318 630 ntBASIC12.55□□□□□ -0.4
CKS1BP61024 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC12.55□□□□□ -0.4
CKS1BP61024 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC12.55□□□□□ -0.4
CKS1BP61024 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms