Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AC124864.1-201ENST00000623408 392 ntBASIC16.98■□□□□ 0.31
LIM2P55344 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LIM2P55344 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LIM2P55344 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LIM2P55344 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LIM2P55344 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
LIM2P55344 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.98■□□□□ 0.31
LIM2P55344 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LIM2P55344 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LIM2P55344 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.98■□□□□ 0.31
LIM2P55344 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.98■□□□□ 0.31
LIM2P55344 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.98■□□□□ 0.31
LIM2P55344 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.98■□□□□ 0.31
LIM2P55344 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LIM2P55344 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LIM2P55344 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.98■□□□□ 0.31
LIM2P55344 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LIM2P55344 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LIM2P55344 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LIM2P55344 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.97■□□□□ 0.31
LIM2P55344 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
LIM2P55344 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LIM2P55344 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LIM2P55344 KRT18P55-202ENST00000578578 1546 ntBASIC16.97■□□□□ 0.31
LIM2P55344 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LIM2P55344 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LIM2P55344 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LIM2P55344 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LIM2P55344 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
LIM2P55344 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LIM2P55344 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
LIM2P55344 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.97■□□□□ 0.31
LIM2P55344 MTCL1P1-201ENST00000446207 792 ntBASIC16.97■□□□□ 0.31
LIM2P55344 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LIM2P55344 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.97■□□□□ 0.31
LIM2P55344 AC112698.1-201ENST00000510299 916 ntBASIC16.97■□□□□ 0.31
LIM2P55344 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.97■□□□□ 0.31
LIM2P55344 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LIM2P55344 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LIM2P55344 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
LIM2P55344 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LIM2P55344 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LIM2P55344 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.97■□□□□ 0.31
LIM2P55344 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LIM2P55344 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LIM2P55344 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LIM2P55344 AC100803.2-201ENST00000562459 1963 ntBASIC16.97■□□□□ 0.31
LIM2P55344 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
LIM2P55344 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.97■□□□□ 0.31
LIM2P55344 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LIM2P55344 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
LIM2P55344 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LIM2P55344 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.96■□□□□ 0.31
LIM2P55344 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LIM2P55344 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LIM2P55344 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.96■□□□□ 0.31
LIM2P55344 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
LIM2P55344 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
LIM2P55344 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
LIM2P55344 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.96■□□□□ 0.31
LIM2P55344 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LIM2P55344 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LIM2P55344 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.96■□□□□ 0.31
LIM2P55344 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LIM2P55344 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LIM2P55344 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.96■□□□□ 0.31
LIM2P55344 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.96■□□□□ 0.31
LIM2P55344 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LIM2P55344 AC069148.1-201ENST00000608741 768 ntBASIC16.96■□□□□ 0.31
LIM2P55344 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LIM2P55344 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.96■□□□□ 0.31
LIM2P55344 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LIM2P55344 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.96■□□□□ 0.31
LIM2P55344 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LIM2P55344 AC020916.1-201ENST00000587762 1774 ntBASIC16.96■□□□□ 0.31
LIM2P55344 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
LIM2P55344 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LIM2P55344 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LIM2P55344 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.96■□□□□ 0.31
LIM2P55344 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LIM2P55344 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LIM2P55344 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LIM2P55344 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LIM2P55344 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
LIM2P55344 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.96■□□□□ 0.3
LIM2P55344 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
LIM2P55344 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LIM2P55344 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
LIM2P55344 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LIM2P55344 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LIM2P55344 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LIM2P55344 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
LIM2P55344 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.95■□□□□ 0.3
LIM2P55344 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LIM2P55344 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.95■□□□□ 0.3
LIM2P55344 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.95■□□□□ 0.3
LIM2P55344 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LIM2P55344 HCG11-201ENST00000411553 5696 ntBASIC16.95■□□□□ 0.3
LIM2P55344 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
LIM2P55344 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms