Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.51■□□□□ 0.39
CDH13P55290 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.51■□□□□ 0.39
CDH13P55290 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CDH13P55290 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH13P55290 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH13P55290 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.51■□□□□ 0.39
CDH13P55290 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.51■□□□□ 0.39
CDH13P55290 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDH13P55290 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH13P55290 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
CDH13P55290 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDH13P55290 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH13P55290 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH13P55290 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH13P55290 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.51■□□□□ 0.39
CDH13P55290 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH13P55290 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDH13P55290 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH13P55290 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.5■□□□□ 0.39
CDH13P55290 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.5■□□□□ 0.39
CDH13P55290 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH13P55290 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH13P55290 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CDH13P55290 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.5■□□□□ 0.39
CDH13P55290 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH13P55290 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDH13P55290 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.5■□□□□ 0.39
CDH13P55290 GCSHP2-201ENST00000560971 527 ntBASIC17.5■□□□□ 0.39
CDH13P55290 AC141257.4-201ENST00000634557 245 ntBASIC17.5■□□□□ 0.39
CDH13P55290 AC136944.6-201ENST00000634818 245 ntBASIC17.5■□□□□ 0.39
CDH13P55290 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH13P55290 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH13P55290 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH13P55290 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CDH13P55290 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH13P55290 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH13P55290 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH13P55290 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
CDH13P55290 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
CDH13P55290 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.5■□□□□ 0.39
CDH13P55290 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH13P55290 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH13P55290 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDH13P55290 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.5■□□□□ 0.39
CDH13P55290 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDH13P55290 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH13P55290 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.5■□□□□ 0.39
CDH13P55290 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH13P55290 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CDH13P55290 AC022898.2-201ENST00000616822 1312 ntBASIC17.49■□□□□ 0.39
CDH13P55290 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDH13P55290 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CDH13P55290 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.49■□□□□ 0.39
CDH13P55290 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CDH13P55290 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CDH13P55290 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH13P55290 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDH13P55290 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDH13P55290 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDH13P55290 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.49■□□□□ 0.39
CDH13P55290 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.49■□□□□ 0.39
CDH13P55290 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.49■□□□□ 0.39
CDH13P55290 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDH13P55290 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH13P55290 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.49■□□□□ 0.39
CDH13P55290 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH13P55290 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.49■□□□□ 0.39
CDH13P55290 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.49■□□□□ 0.39
CDH13P55290 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.49■□□□□ 0.39
CDH13P55290 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH13P55290 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
CDH13P55290 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
CDH13P55290 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH13P55290 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.49■□□□□ 0.39
CDH13P55290 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CDH13P55290 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CDH13P55290 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CDH13P55290 KRT18P22-201ENST00000402024 1347 ntBASIC17.48■□□□□ 0.39
CDH13P55290 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH13P55290 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH13P55290 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH13P55290 SIRPAP1-201ENST00000448467 1770 ntBASIC17.48■□□□□ 0.39
CDH13P55290 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDH13P55290 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH13P55290 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CDH13P55290 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH13P55290 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CDH13P55290 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDH13P55290 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH13P55290 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH13P55290 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CDH13P55290 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CDH13P55290 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH13P55290 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.48■□□□□ 0.39
CDH13P55290 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH13P55290 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH13P55290 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.48■□□□□ 0.39
CDH13P55290 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.48■□□□□ 0.39
CDH13P55290 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH13P55290 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms