Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH12P55289 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.68■□□□□ 0.26
CDH12P55289 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH12P55289 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CDH12P55289 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH12P55289 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH12P55289 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CDH12P55289 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH12P55289 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH12P55289 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH12P55289 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH12P55289 AL024508.2-201ENST00000607749 1894 ntBASIC16.68■□□□□ 0.26
CDH12P55289 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH12P55289 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.68■□□□□ 0.26
CDH12P55289 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.68■□□□□ 0.26
CDH12P55289 AC128688.1-201ENST00000487626 519 ntBASIC16.68■□□□□ 0.26
CDH12P55289 AC010947.1-201ENST00000623454 693 ntBASIC16.68■□□□□ 0.26
CDH12P55289 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.68■□□□□ 0.26
CDH12P55289 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH12P55289 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.68■□□□□ 0.26
CDH12P55289 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.68■□□□□ 0.26
CDH12P55289 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.68■□□□□ 0.26
CDH12P55289 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH12P55289 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH12P55289 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CDH12P55289 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CDH12P55289 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH12P55289 CROCCP1-201ENST00000426910 5675 ntBASIC16.68■□□□□ 0.26
CDH12P55289 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.67■□□□□ 0.26
CDH12P55289 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CDH12P55289 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CDH12P55289 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.67■□□□□ 0.26
CDH12P55289 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CDH12P55289 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.67■□□□□ 0.26
CDH12P55289 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CDH12P55289 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDH12P55289 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDH12P55289 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.67■□□□□ 0.26
CDH12P55289 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDH12P55289 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.67■□□□□ 0.26
CDH12P55289 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH12P55289 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDH12P55289 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDH12P55289 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.67■□□□□ 0.26
CDH12P55289 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.67■□□□□ 0.26
CDH12P55289 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDH12P55289 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDH12P55289 NAPSB-206ENST00000562112 1266 ntBASIC16.67■□□□□ 0.26
CDH12P55289 AC009065.1-201ENST00000564055 1225 ntBASIC16.67■□□□□ 0.26
CDH12P55289 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.67■□□□□ 0.26
CDH12P55289 MIR3180-4-201ENST00000582223 153 ntBASIC16.67■□□□□ 0.26
CDH12P55289 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH12P55289 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.67■□□□□ 0.26
CDH12P55289 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH12P55289 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH12P55289 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH12P55289 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH12P55289 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH12P55289 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH12P55289 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH12P55289 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
CDH12P55289 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.67■□□□□ 0.26
CDH12P55289 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.67■□□□□ 0.26
CDH12P55289 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH12P55289 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDH12P55289 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDH12P55289 AC084018.2-201ENST00000613093 2607 ntBASIC16.66■□□□□ 0.26
CDH12P55289 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.66■□□□□ 0.26
CDH12P55289 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH12P55289 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH12P55289 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.66■□□□□ 0.26
CDH12P55289 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDH12P55289 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH12P55289 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CDH12P55289 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CDH12P55289 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH12P55289 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH12P55289 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CDH12P55289 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH12P55289 MMP23A-201ENST00000234610 1017 ntBASIC16.66■□□□□ 0.26
CDH12P55289 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDH12P55289 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDH12P55289 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDH12P55289 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CDH12P55289 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH12P55289 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH12P55289 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDH12P55289 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH12P55289 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH12P55289 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDH12P55289 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDH12P55289 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH12P55289 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.66■□□□□ 0.26
CDH12P55289 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.66■□□□□ 0.26
CDH12P55289 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
CDH12P55289 AP001094.4-201ENST00000579008 2176 ntBASIC16.66■□□□□ 0.26
CDH12P55289 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CDH12P55289 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.66■□□□□ 0.26
CDH12P55289 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDH12P55289 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms