Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 FITM1-202ENST00000559294 800 ntBASIC16.99■□□□□ 0.31
NR1H2P55055 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NR1H2P55055 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.99■□□□□ 0.31
NR1H2P55055 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
NR1H2P55055 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NR1H2P55055 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NR1H2P55055 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
NR1H2P55055 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NR1H2P55055 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
NR1H2P55055 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NR1H2P55055 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NR1H2P55055 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NR1H2P55055 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
NR1H2P55055 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
NR1H2P55055 AC105020.1-201ENST00000435356 2205 ntBASIC16.98■□□□□ 0.31
NR1H2P55055 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NR1H2P55055 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NR1H2P55055 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
NR1H2P55055 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
NR1H2P55055 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.98■□□□□ 0.31
NR1H2P55055 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
NR1H2P55055 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
NR1H2P55055 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
NR1H2P55055 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NR1H2P55055 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
NR1H2P55055 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NR1H2P55055 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.98■□□□□ 0.31
NR1H2P55055 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.98■□□□□ 0.31
NR1H2P55055 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NR1H2P55055 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
NR1H2P55055 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NR1H2P55055 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NR1H2P55055 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.98■□□□□ 0.31
NR1H2P55055 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NR1H2P55055 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.98■□□□□ 0.31
NR1H2P55055 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.98■□□□□ 0.31
NR1H2P55055 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.98■□□□□ 0.31
NR1H2P55055 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.98■□□□□ 0.31
NR1H2P55055 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.98■□□□□ 0.31
NR1H2P55055 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NR1H2P55055 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.98■□□□□ 0.31
NR1H2P55055 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.98■□□□□ 0.31
NR1H2P55055 DGCR10-201ENST00000609839 495 ntBASIC16.98■□□□□ 0.31
NR1H2P55055 AC005363.2-201ENST00000618631 242 ntBASIC16.98■□□□□ 0.31
NR1H2P55055 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.98■□□□□ 0.31
NR1H2P55055 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NR1H2P55055 AC131212.4-201ENST00000623606 975 ntBASIC16.98■□□□□ 0.31
NR1H2P55055 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.98■□□□□ 0.31
NR1H2P55055 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NR1H2P55055 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.98■□□□□ 0.31
NR1H2P55055 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
NR1H2P55055 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NR1H2P55055 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NR1H2P55055 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NR1H2P55055 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.98■□□□□ 0.31
NR1H2P55055 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.98■□□□□ 0.31
NR1H2P55055 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NR1H2P55055 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NR1H2P55055 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
NR1H2P55055 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NR1H2P55055 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NR1H2P55055 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NR1H2P55055 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NR1H2P55055 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NR1H2P55055 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NR1H2P55055 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NR1H2P55055 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
NR1H2P55055 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NR1H2P55055 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NR1H2P55055 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NR1H2P55055 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NR1H2P55055 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NR1H2P55055 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.97■□□□□ 0.31
NR1H2P55055 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NR1H2P55055 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.97■□□□□ 0.31
NR1H2P55055 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.97■□□□□ 0.31
NR1H2P55055 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NR1H2P55055 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NR1H2P55055 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.97■□□□□ 0.31
NR1H2P55055 MIR6786-201ENST00000616843 113 ntBASIC16.97■□□□□ 0.31
NR1H2P55055 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
NR1H2P55055 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
NR1H2P55055 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.97■□□□□ 0.31
NR1H2P55055 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NR1H2P55055 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NR1H2P55055 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.97■□□□□ 0.31
NR1H2P55055 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
NR1H2P55055 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NR1H2P55055 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NR1H2P55055 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
NR1H2P55055 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
NR1H2P55055 KRT18P22-201ENST00000402024 1347 ntBASIC16.96■□□□□ 0.31
NR1H2P55055 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
NR1H2P55055 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
NR1H2P55055 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NR1H2P55055 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NR1H2P55055 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NR1H2P55055 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NR1H2P55055 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
NR1H2P55055 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms