Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFC5P40937 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFC5P40937 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFC5P40937 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.7■□□□□ 0.74
RFC5P40937 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFC5P40937 COX5BP2-201ENST00000392354 334 ntBASIC19.7■□□□□ 0.74
RFC5P40937 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.7■□□□□ 0.74
RFC5P40937 RBM17P3-201ENST00000417687 1192 ntBASIC19.7■□□□□ 0.74
RFC5P40937 AF238378.1-201ENST00000526806 358 ntBASIC19.7■□□□□ 0.74
RFC5P40937 AL160237.2-201ENST00000556165 472 ntBASIC19.7■□□□□ 0.74
RFC5P40937 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.7■□□□□ 0.74
RFC5P40937 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.7■□□□□ 0.74
RFC5P40937 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RFC5P40937 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RFC5P40937 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.7■□□□□ 0.74
RFC5P40937 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
RFC5P40937 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFC5P40937 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFC5P40937 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RFC5P40937 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFC5P40937 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFC5P40937 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFC5P40937 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RFC5P40937 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RFC5P40937 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
RFC5P40937 KRT18P55-202ENST00000578578 1546 ntBASIC19.7■□□□□ 0.74
RFC5P40937 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFC5P40937 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
RFC5P40937 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFC5P40937 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
RFC5P40937 AC100803.2-201ENST00000562459 1963 ntBASIC19.7■□□□□ 0.74
RFC5P40937 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.69■□□□□ 0.74
RFC5P40937 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFC5P40937 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.69■□□□□ 0.74
RFC5P40937 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
RFC5P40937 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
RFC5P40937 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.69■□□□□ 0.74
RFC5P40937 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.69■□□□□ 0.74
RFC5P40937 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFC5P40937 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
RFC5P40937 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFC5P40937 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.69■□□□□ 0.74
RFC5P40937 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.69■□□□□ 0.74
RFC5P40937 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RFC5P40937 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.69■□□□□ 0.74
RFC5P40937 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RFC5P40937 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RFC5P40937 DDX43P3-201ENST00000441064 443 ntBASIC19.69■□□□□ 0.74
RFC5P40937 ABCD1P5-201ENST00000445663 754 ntBASIC19.69■□□□□ 0.74
RFC5P40937 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.69■□□□□ 0.74
RFC5P40937 AC079781.3-201ENST00000449110 356 ntBASIC19.69■□□□□ 0.74
RFC5P40937 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.69■□□□□ 0.74
RFC5P40937 AC106795.1-205ENST00000512851 1056 ntBASIC19.69■□□□□ 0.74
RFC5P40937 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.69■□□□□ 0.74
RFC5P40937 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.69■□□□□ 0.74
RFC5P40937 AC104692.2-201ENST00000603054 253 ntBASIC19.69■□□□□ 0.74
RFC5P40937 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.69■□□□□ 0.74
RFC5P40937 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFC5P40937 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFC5P40937 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFC5P40937 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.69■□□□□ 0.74
RFC5P40937 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RFC5P40937 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RFC5P40937 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
RFC5P40937 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFC5P40937 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFC5P40937 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
RFC5P40937 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFC5P40937 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.68■□□□□ 0.74
RFC5P40937 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFC5P40937 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFC5P40937 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFC5P40937 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFC5P40937 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFC5P40937 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFC5P40937 AC138028.4-201ENST00000564984 1845 ntBASIC19.68■□□□□ 0.74
RFC5P40937 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFC5P40937 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFC5P40937 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.68■□□□□ 0.74
RFC5P40937 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.68■□□□□ 0.74
RFC5P40937 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.68■□□□□ 0.74
RFC5P40937 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RFC5P40937 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.68■□□□□ 0.74
RFC5P40937 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFC5P40937 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFC5P40937 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
RFC5P40937 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
RFC5P40937 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFC5P40937 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFC5P40937 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFC5P40937 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFC5P40937 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RFC5P40937 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
RFC5P40937 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.67■□□□□ 0.74
RFC5P40937 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RFC5P40937 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.67■□□□□ 0.74
RFC5P40937 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFC5P40937 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RFC5P40937 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFC5P40937 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms