Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC22.54■■□□□ 1.2
COL15A1P39059 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
COL15A1P39059 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
COL15A1P39059 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC22.54■■□□□ 1.2
COL15A1P39059 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC22.54■■□□□ 1.2
COL15A1P39059 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
COL15A1P39059 AL589182.2-201ENST00000619332 1049 ntBASIC22.54■■□□□ 1.2
COL15A1P39059 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL15A1P39059 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL15A1P39059 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
COL15A1P39059 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
COL15A1P39059 MED29-202ENST00000594368 1471 ntTSL 2 BASIC22.54■■□□□ 1.2
COL15A1P39059 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
COL15A1P39059 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
COL15A1P39059 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL15A1P39059 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL15A1P39059 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL15A1P39059 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL15A1P39059 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL15A1P39059 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
COL15A1P39059 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC22.53■■□□□ 1.2
COL15A1P39059 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC22.53■■□□□ 1.2
COL15A1P39059 SLC4A1APP2-201ENST00000424054 1259 ntBASIC22.53■■□□□ 1.2
COL15A1P39059 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC22.53■■□□□ 1.2
COL15A1P39059 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
COL15A1P39059 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC22.53■■□□□ 1.2
COL15A1P39059 COX5A-206ENST00000568783 571 ntTSL 3 BASIC22.53■■□□□ 1.2
COL15A1P39059 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
COL15A1P39059 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL15A1P39059 AC148477.5-201ENST00000625164 1645 ntBASIC22.53■■□□□ 1.2
COL15A1P39059 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL15A1P39059 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
COL15A1P39059 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL15A1P39059 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC22.53■■□□□ 1.2
COL15A1P39059 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL15A1P39059 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
COL15A1P39059 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL15A1P39059 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL15A1P39059 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
COL15A1P39059 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
COL15A1P39059 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
COL15A1P39059 AC002310.6-201ENST00000624451 1377 ntBASIC22.53■■□□□ 1.2
COL15A1P39059 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
COL15A1P39059 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC22.53■■□□□ 1.2
COL15A1P39059 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC22.53■■□□□ 1.2
COL15A1P39059 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
COL15A1P39059 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
COL15A1P39059 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL15A1P39059 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL15A1P39059 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL15A1P39059 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC22.52■■□□□ 1.2
COL15A1P39059 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC22.52■■□□□ 1.2
COL15A1P39059 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC22.52■■□□□ 1.2
COL15A1P39059 YBX1P5-201ENST00000509441 847 ntBASIC22.52■■□□□ 1.2
COL15A1P39059 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC22.52■■□□□ 1.2
COL15A1P39059 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC22.52■■□□□ 1.2
COL15A1P39059 AC004706.3-202ENST00000621574 984 ntBASIC22.52■■□□□ 1.2
COL15A1P39059 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL15A1P39059 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
COL15A1P39059 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL15A1P39059 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL15A1P39059 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL15A1P39059 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
COL15A1P39059 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL15A1P39059 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
COL15A1P39059 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC22.52■■□□□ 1.2
COL15A1P39059 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL15A1P39059 AL020996.1-203ENST00000536896 2307 ntBASIC22.52■■□□□ 1.2
COL15A1P39059 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.19
COL15A1P39059 AL353593.2-201ENST00000602529 1483 ntBASIC22.52■■□□□ 1.19
COL15A1P39059 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
COL15A1P39059 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL15A1P39059 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC22.51■■□□□ 1.19
COL15A1P39059 AC103564.2-201ENST00000432853 1299 ntBASIC22.51■■□□□ 1.19
COL15A1P39059 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC22.51■■□□□ 1.19
COL15A1P39059 AC108073.2-201ENST00000464002 357 ntBASIC22.51■■□□□ 1.19
COL15A1P39059 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC22.51■■□□□ 1.19
COL15A1P39059 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC22.51■■□□□ 1.19
COL15A1P39059 TCAP-202ENST00000578283 583 ntTSL 5 BASIC22.51■■□□□ 1.19
COL15A1P39059 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
COL15A1P39059 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC22.51■■□□□ 1.19
COL15A1P39059 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL15A1P39059 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC22.51■■□□□ 1.19
COL15A1P39059 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
COL15A1P39059 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL15A1P39059 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL15A1P39059 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
COL15A1P39059 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
COL15A1P39059 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL15A1P39059 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
COL15A1P39059 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL15A1P39059 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL15A1P39059 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC22.5■■□□□ 1.19
COL15A1P39059 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC22.5■■□□□ 1.19
COL15A1P39059 PON3-205ENST00000451904 1053 ntTSL 3 BASIC22.5■■□□□ 1.19
COL15A1P39059 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC22.5■■□□□ 1.19
COL15A1P39059 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC22.5■■□□□ 1.19
COL15A1P39059 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
COL15A1P39059 AC006504.4-201ENST00000592118 1568 ntBASIC22.5■■□□□ 1.19
COL15A1P39059 POR-209ENST00000439269 1858 ntTSL 2 BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms