Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PDE6BP35913 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
PDE6BP35913 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
PDE6BP35913 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
PDE6BP35913 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC21.92■■□□□ 1.1
PDE6BP35913 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDE6BP35913 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDE6BP35913 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
PDE6BP35913 AC093010.1-201ENST00000473625 1624 ntBASIC21.91■■□□□ 1.1
PDE6BP35913 FUT8-AS1-201ENST00000621019 1521 ntBASIC21.91■■□□□ 1.1
PDE6BP35913 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDE6BP35913 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PDE6BP35913 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDE6BP35913 BCAR1-209ENST00000546196 1340 ntBASIC21.91■■□□□ 1.1
PDE6BP35913 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PDE6BP35913 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDE6BP35913 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PDE6BP35913 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PDE6BP35913 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC21.91■■□□□ 1.1
PDE6BP35913 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDE6BP35913 TSEN15P1-201ENST00000423257 515 ntBASIC21.91■■□□□ 1.1
PDE6BP35913 KRT19P2-202ENST00000557173 1012 ntBASIC21.91■■□□□ 1.1
PDE6BP35913 RIN3-211ENST00000557762 517 ntTSL 3 BASIC21.91■■□□□ 1.1
PDE6BP35913 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC21.91■■□□□ 1.1
PDE6BP35913 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC21.91■■□□□ 1.1
PDE6BP35913 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
PDE6BP35913 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC21.91■■□□□ 1.1
PDE6BP35913 AQP6-205ENST00000618286 829 ntTSL 5 BASIC21.91■■□□□ 1.1
PDE6BP35913 AC010507.1-201ENST00000633895 436 ntBASIC21.91■■□□□ 1.1
PDE6BP35913 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDE6BP35913 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PDE6BP35913 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDE6BP35913 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDE6BP35913 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PDE6BP35913 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDE6BP35913 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PDE6BP35913 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PDE6BP35913 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDE6BP35913 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.91■■□□□ 1.1
PDE6BP35913 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
PDE6BP35913 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDE6BP35913 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PDE6BP35913 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDE6BP35913 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDE6BP35913 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PDE6BP35913 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.9■■□□□ 1.1
PDE6BP35913 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PDE6BP35913 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PDE6BP35913 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDE6BP35913 WDR53-203ENST00000429115 683 ntTSL 2 BASIC21.9■■□□□ 1.1
PDE6BP35913 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21.9■■□□□ 1.1
PDE6BP35913 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC21.9■■□□□ 1.1
PDE6BP35913 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
PDE6BP35913 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC21.9■■□□□ 1.1
PDE6BP35913 SPCS2P1-201ENST00000561636 679 ntBASIC21.9■■□□□ 1.1
PDE6BP35913 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PDE6BP35913 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC21.9■■□□□ 1.1
PDE6BP35913 AC093028.1-201ENST00000622998 982 ntBASIC21.9■■□□□ 1.1
PDE6BP35913 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC21.9■■□□□ 1.1
PDE6BP35913 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PDE6BP35913 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
PDE6BP35913 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDE6BP35913 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDE6BP35913 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDE6BP35913 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.9■■□□□ 1.1
PDE6BP35913 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PDE6BP35913 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
PDE6BP35913 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PDE6BP35913 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PDE6BP35913 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
PDE6BP35913 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC21.89■■□□□ 1.09
PDE6BP35913 RHOQP3-201ENST00000437982 621 ntBASIC21.89■■□□□ 1.09
PDE6BP35913 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
PDE6BP35913 POLD4-207ENST00000531239 584 ntTSL 2 BASIC21.89■■□□□ 1.09
PDE6BP35913 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC21.89■■□□□ 1.09
PDE6BP35913 RNF34-208ENST00000555076 593 ntTSL 3 BASIC21.89■■□□□ 1.09
PDE6BP35913 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC21.89■■□□□ 1.09
PDE6BP35913 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.09
PDE6BP35913 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC21.89■■□□□ 1.09
PDE6BP35913 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
PDE6BP35913 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PDE6BP35913 PC-214ENST00000628663 1470 ntTSL 5 BASIC21.89■■□□□ 1.09
PDE6BP35913 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PDE6BP35913 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC21.88■■□□□ 1.09
PDE6BP35913 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDE6BP35913 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC21.88■■□□□ 1.09
PDE6BP35913 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDE6BP35913 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDE6BP35913 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
PDE6BP35913 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDE6BP35913 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PDE6BP35913 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.88■■□□□ 1.09
PDE6BP35913 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDE6BP35913 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC21.88■■□□□ 1.09
PDE6BP35913 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDE6BP35913 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDE6BP35913 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDE6BP35913 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDE6BP35913 AL035633.1-201ENST00000406139 838 ntBASIC21.88■■□□□ 1.09
PDE6BP35913 FAM58CP-201ENST00000435741 640 ntBASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms