Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.04■□□□□ 0.32
KRT20P35900 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KRT20P35900 LINC01238-205ENST00000567549 1107 ntBASIC17.04■□□□□ 0.32
KRT20P35900 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.04■□□□□ 0.32
KRT20P35900 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
KRT20P35900 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KRT20P35900 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.04■□□□□ 0.32
KRT20P35900 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT20P35900 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.04■□□□□ 0.32
KRT20P35900 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.04■□□□□ 0.32
KRT20P35900 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KRT20P35900 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
KRT20P35900 AC012317.2-201ENST00000623305 2251 ntBASIC17.04■□□□□ 0.32
KRT20P35900 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT20P35900 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT20P35900 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KRT20P35900 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.04■□□□□ 0.32
KRT20P35900 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.04■□□□□ 0.32
KRT20P35900 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.03■□□□□ 0.32
KRT20P35900 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT20P35900 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
KRT20P35900 AC138028.4-201ENST00000564984 1845 ntBASIC17.03■□□□□ 0.32
KRT20P35900 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT20P35900 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT20P35900 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.03■□□□□ 0.32
KRT20P35900 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.03■□□□□ 0.32
KRT20P35900 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.03■□□□□ 0.32
KRT20P35900 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.03■□□□□ 0.32
KRT20P35900 AL163051.1-201ENST00000569214 1512 ntBASIC17.03■□□□□ 0.32
KRT20P35900 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
KRT20P35900 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT20P35900 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT20P35900 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
KRT20P35900 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT20P35900 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT20P35900 MIR149-201ENST00000384879 89 ntBASIC17.03■□□□□ 0.32
KRT20P35900 SEC1P-202ENST00000473944 940 ntBASIC17.03■□□□□ 0.32
KRT20P35900 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.03■□□□□ 0.32
KRT20P35900 YBX1P2-201ENST00000489612 999 ntBASIC17.03■□□□□ 0.32
KRT20P35900 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
KRT20P35900 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.03■□□□□ 0.32
KRT20P35900 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.03■□□□□ 0.32
KRT20P35900 GCSHP2-201ENST00000560971 527 ntBASIC17.03■□□□□ 0.32
KRT20P35900 RN7SL850P-201ENST00000579959 291 ntBASIC17.03■□□□□ 0.32
KRT20P35900 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.03■□□□□ 0.32
KRT20P35900 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.03■□□□□ 0.32
KRT20P35900 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.03■□□□□ 0.32
KRT20P35900 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT20P35900 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT20P35900 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT20P35900 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.03■□□□□ 0.32
KRT20P35900 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
KRT20P35900 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
KRT20P35900 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
KRT20P35900 AC093677.2-201ENST00000600169 1863 ntBASIC17.03■□□□□ 0.32
KRT20P35900 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
KRT20P35900 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
KRT20P35900 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT20P35900 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT20P35900 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT20P35900 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.03■□□□□ 0.32
KRT20P35900 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.03■□□□□ 0.32
KRT20P35900 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.03■□□□□ 0.32
KRT20P35900 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
KRT20P35900 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
KRT20P35900 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
KRT20P35900 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
KRT20P35900 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
KRT20P35900 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
KRT20P35900 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
KRT20P35900 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
KRT20P35900 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.02■□□□□ 0.32
KRT20P35900 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
KRT20P35900 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
KRT20P35900 AL645608.8-201ENST00000606034 2086 ntBASIC17.02■□□□□ 0.32
KRT20P35900 AC009102.3-201ENST00000623118 1491 ntBASIC17.02■□□□□ 0.32
KRT20P35900 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
KRT20P35900 RNF152P1-201ENST00000397754 604 ntBASIC17.02■□□□□ 0.32
KRT20P35900 RCN1P1-201ENST00000400413 996 ntBASIC17.02■□□□□ 0.32
KRT20P35900 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
KRT20P35900 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.02■□□□□ 0.32
KRT20P35900 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.02■□□□□ 0.32
KRT20P35900 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
KRT20P35900 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
KRT20P35900 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
KRT20P35900 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.02■□□□□ 0.31
KRT20P35900 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
KRT20P35900 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
KRT20P35900 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
KRT20P35900 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
KRT20P35900 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
KRT20P35900 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
KRT20P35900 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
KRT20P35900 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
KRT20P35900 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
KRT20P35900 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.02■□□□□ 0.31
KRT20P35900 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.01■□□□□ 0.31
KRT20P35900 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KRT20P35900 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.01■□□□□ 0.31
KRT20P35900 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms