Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CASQ1P31415 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CASQ1P31415 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CASQ1P31415 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CASQ1P31415 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CASQ1P31415 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CASQ1P31415 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CASQ1P31415 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CASQ1P31415 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
CASQ1P31415 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CASQ1P31415 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.22■□□□□ 0.67
CASQ1P31415 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CASQ1P31415 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CASQ1P31415 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.22■□□□□ 0.67
CASQ1P31415 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CASQ1P31415 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CASQ1P31415 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.22■□□□□ 0.67
CASQ1P31415 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.22■□□□□ 0.67
CASQ1P31415 AC026271.2-201ENST00000428091 497 ntBASIC19.22■□□□□ 0.67
CASQ1P31415 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.22■□□□□ 0.67
CASQ1P31415 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
CASQ1P31415 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.22■□□□□ 0.67
CASQ1P31415 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.22■□□□□ 0.67
CASQ1P31415 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.22■□□□□ 0.67
CASQ1P31415 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.22■□□□□ 0.67
CASQ1P31415 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.22■□□□□ 0.67
CASQ1P31415 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.22■□□□□ 0.67
CASQ1P31415 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
CASQ1P31415 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CASQ1P31415 AC100803.2-201ENST00000562459 1963 ntBASIC19.22■□□□□ 0.67
CASQ1P31415 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CASQ1P31415 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CASQ1P31415 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CASQ1P31415 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.22■□□□□ 0.67
CASQ1P31415 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
CASQ1P31415 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CASQ1P31415 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CASQ1P31415 HLA-J-201ENST00000462773 1622 ntBASIC19.22■□□□□ 0.67
CASQ1P31415 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CASQ1P31415 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CASQ1P31415 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CASQ1P31415 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CASQ1P31415 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CASQ1P31415 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.21■□□□□ 0.67
CASQ1P31415 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CASQ1P31415 GPAT2P1-201ENST00000444924 1672 ntBASIC19.21■□□□□ 0.67
CASQ1P31415 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CASQ1P31415 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.21■□□□□ 0.67
CASQ1P31415 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CASQ1P31415 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CASQ1P31415 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.21■□□□□ 0.67
CASQ1P31415 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CASQ1P31415 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.21■□□□□ 0.67
CASQ1P31415 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.21■□□□□ 0.67
CASQ1P31415 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CASQ1P31415 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.21■□□□□ 0.67
CASQ1P31415 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
CASQ1P31415 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CASQ1P31415 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.21■□□□□ 0.67
CASQ1P31415 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CASQ1P31415 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.21■□□□□ 0.67
CASQ1P31415 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CASQ1P31415 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CASQ1P31415 MTDHP1-201ENST00000605323 784 ntBASIC19.21■□□□□ 0.67
CASQ1P31415 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CASQ1P31415 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.21■□□□□ 0.67
CASQ1P31415 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.21■□□□□ 0.67
CASQ1P31415 AC011298.2-201ENST00000617989 482 ntBASIC19.21■□□□□ 0.67
CASQ1P31415 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.21■□□□□ 0.67
CASQ1P31415 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.21■□□□□ 0.67
CASQ1P31415 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CASQ1P31415 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CASQ1P31415 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CASQ1P31415 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CASQ1P31415 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CASQ1P31415 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CASQ1P31415 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CASQ1P31415 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CASQ1P31415 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CASQ1P31415 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CASQ1P31415 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
CASQ1P31415 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.21■□□□□ 0.67
CASQ1P31415 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
CASQ1P31415 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CASQ1P31415 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC19.21■□□□□ 0.66
CASQ1P31415 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CASQ1P31415 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CASQ1P31415 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CASQ1P31415 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.2■□□□□ 0.66
CASQ1P31415 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CASQ1P31415 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CASQ1P31415 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.2■□□□□ 0.66
CASQ1P31415 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CASQ1P31415 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CASQ1P31415 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CASQ1P31415 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CASQ1P31415 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CASQ1P31415 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CASQ1P31415 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.2■□□□□ 0.66
CASQ1P31415 NIFKP9-201ENST00000419265 221 ntBASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms