Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
LMO1P25800 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LMO1P25800 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LMO1P25800 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.03■□□□□ -0
LMO1P25800 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC15.03■□□□□ -0
LMO1P25800 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC15.03■□□□□ -0
LMO1P25800 HBZP1-201ENST00000354915 429 ntBASIC15.03■□□□□ -0
LMO1P25800 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LMO1P25800 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LMO1P25800 AK4P3-201ENST00000418260 669 ntBASIC15.03■□□□□ -0
LMO1P25800 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.03■□□□□ -0
LMO1P25800 AC092597.1-201ENST00000487352 616 ntBASIC15.03■□□□□ -0
LMO1P25800 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC15.03■□□□□ -0
LMO1P25800 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC15.03■□□□□ -0
LMO1P25800 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.03■□□□□ -0
LMO1P25800 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC15.03■□□□□ -0
LMO1P25800 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.03■□□□□ -0
LMO1P25800 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC15.03■□□□□ -0
LMO1P25800 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC15.03■□□□□ -0
LMO1P25800 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.03■□□□□ -0
LMO1P25800 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC15.03■□□□□ -0
LMO1P25800 AC009154.2-201ENST00000621177 724 ntBASIC15.03■□□□□ -0
LMO1P25800 AC006011.2-201ENST00000621313 1158 ntBASIC15.03■□□□□ -0
LMO1P25800 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.03■□□□□ -0
LMO1P25800 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LMO1P25800 AC100803.2-201ENST00000562459 1963 ntBASIC15.03■□□□□ -0
LMO1P25800 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
LMO1P25800 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
LMO1P25800 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.03■□□□□ -0
LMO1P25800 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.03■□□□□ -0
LMO1P25800 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.03■□□□□ -0
LMO1P25800 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LMO1P25800 AD000864.1-201ENST00000624076 2295 ntBASIC15.03■□□□□ -0
LMO1P25800 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
LMO1P25800 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
LMO1P25800 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LMO1P25800 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.02■□□□□ -0
LMO1P25800 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC15.02■□□□□ -0
LMO1P25800 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LMO1P25800 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.02■□□□□ -0
LMO1P25800 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
LMO1P25800 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.02■□□□□ -0
LMO1P25800 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
LMO1P25800 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
LMO1P25800 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LMO1P25800 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LMO1P25800 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.02■□□□□ -0
LMO1P25800 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LMO1P25800 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
LMO1P25800 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LMO1P25800 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.02■□□□□ -0
LMO1P25800 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.02■□□□□ -0
LMO1P25800 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.02■□□□□ -0
LMO1P25800 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.02■□□□□ -0
LMO1P25800 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.02■□□□□ -0
LMO1P25800 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.02■□□□□ -0
LMO1P25800 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
LMO1P25800 PPOX-219ENST00000544598 813 ntTSL 2 BASIC15.02■□□□□ -0
LMO1P25800 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.02■□□□□ -0
LMO1P25800 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.02■□□□□ -0
LMO1P25800 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.02■□□□□ -0
LMO1P25800 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.02■□□□□ -0
LMO1P25800 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
LMO1P25800 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
LMO1P25800 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.02□□□□□ -0.01
LMO1P25800 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LMO1P25800 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.02□□□□□ -0.01
LMO1P25800 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LMO1P25800 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LMO1P25800 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LMO1P25800 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LMO1P25800 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.02□□□□□ -0.01
LMO1P25800 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LMO1P25800 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LMO1P25800 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
LMO1P25800 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LMO1P25800 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LMO1P25800 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.01□□□□□ -0.01
LMO1P25800 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LMO1P25800 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LMO1P25800 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
LMO1P25800 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LMO1P25800 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.01□□□□□ -0.01
LMO1P25800 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LMO1P25800 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.01□□□□□ -0.01
LMO1P25800 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
LMO1P25800 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LMO1P25800 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LMO1P25800 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LMO1P25800 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.01□□□□□ -0.01
LMO1P25800 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LMO1P25800 IGHGP-201ENST00000390555 1178 ntBASIC15.01□□□□□ -0.01
LMO1P25800 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.01□□□□□ -0.01
LMO1P25800 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC15.01□□□□□ -0.01
LMO1P25800 KRT18P57-201ENST00000443599 1254 ntBASIC15.01□□□□□ -0.01
LMO1P25800 KRT18P38-201ENST00000449496 1282 ntBASIC15.01□□□□□ -0.01
LMO1P25800 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC15.01□□□□□ -0.01
LMO1P25800 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.01□□□□□ -0.01
LMO1P25800 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.01□□□□□ -0.01
LMO1P25800 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms