Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ACKR3P25106 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ACKR3P25106 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ACKR3P25106 ANKRD20A18P-201ENST00000359341 492 ntBASIC15.56■□□□□ 0.08
ACKR3P25106 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.56■□□□□ 0.08
ACKR3P25106 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.56■□□□□ 0.08
ACKR3P25106 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ACKR3P25106 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC15.56■□□□□ 0.08
ACKR3P25106 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC15.56■□□□□ 0.08
ACKR3P25106 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.56■□□□□ 0.08
ACKR3P25106 COX11P1-201ENST00000489116 835 ntBASIC15.56■□□□□ 0.08
ACKR3P25106 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.56■□□□□ 0.08
ACKR3P25106 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC15.56■□□□□ 0.08
ACKR3P25106 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.56■□□□□ 0.08
ACKR3P25106 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
ACKR3P25106 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ACKR3P25106 AC140113.3-201ENST00000605663 199 ntBASIC15.56■□□□□ 0.08
ACKR3P25106 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.56■□□□□ 0.08
ACKR3P25106 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
ACKR3P25106 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
ACKR3P25106 AC005363.2-201ENST00000618631 242 ntBASIC15.56■□□□□ 0.08
ACKR3P25106 AC079602.3-201ENST00000623931 403 ntBASIC15.56■□□□□ 0.08
ACKR3P25106 AC073508.3-201ENST00000619697 1419 ntBASIC15.56■□□□□ 0.08
ACKR3P25106 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ACKR3P25106 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
ACKR3P25106 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ACKR3P25106 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
ACKR3P25106 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.56■□□□□ 0.08
ACKR3P25106 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ACKR3P25106 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.56■□□□□ 0.08
ACKR3P25106 LINC00602-201ENST00000629776 2065 ntBASIC15.56■□□□□ 0.08
ACKR3P25106 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
ACKR3P25106 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ACKR3P25106 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ACKR3P25106 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ACKR3P25106 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ACKR3P25106 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
ACKR3P25106 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.56■□□□□ 0.08
ACKR3P25106 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ACKR3P25106 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ACKR3P25106 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
ACKR3P25106 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ACKR3P25106 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.55■□□□□ 0.08
ACKR3P25106 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
ACKR3P25106 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
ACKR3P25106 AC124067.4-201ENST00000519691 2379 ntBASIC15.55■□□□□ 0.08
ACKR3P25106 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ACKR3P25106 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
ACKR3P25106 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC15.55■□□□□ 0.08
ACKR3P25106 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
ACKR3P25106 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ACKR3P25106 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ACKR3P25106 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ACKR3P25106 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ACKR3P25106 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ACKR3P25106 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ACKR3P25106 AL137013.1-201ENST00000432946 1228 ntBASIC15.55■□□□□ 0.08
ACKR3P25106 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.55■□□□□ 0.08
ACKR3P25106 AC008687.5-201ENST00000593746 558 ntBASIC15.55■□□□□ 0.08
ACKR3P25106 AC011558.1-201ENST00000623459 338 ntBASIC15.55■□□□□ 0.08
ACKR3P25106 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC15.55■□□□□ 0.08
ACKR3P25106 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ACKR3P25106 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
ACKR3P25106 AC011270.2-201ENST00000624293 2550 ntBASIC15.55■□□□□ 0.08
ACKR3P25106 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ACKR3P25106 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.55■□□□□ 0.08
ACKR3P25106 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
ACKR3P25106 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
ACKR3P25106 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
ACKR3P25106 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ACKR3P25106 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
ACKR3P25106 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
ACKR3P25106 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
ACKR3P25106 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.54■□□□□ 0.08
ACKR3P25106 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ACKR3P25106 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ACKR3P25106 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ACKR3P25106 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
ACKR3P25106 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ACKR3P25106 SPDYE15P-201ENST00000424157 909 ntBASIC15.54■□□□□ 0.08
ACKR3P25106 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.54■□□□□ 0.08
ACKR3P25106 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.54■□□□□ 0.08
ACKR3P25106 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ACKR3P25106 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
ACKR3P25106 AC139887.4-201ENST00000607877 719 ntBASIC15.54■□□□□ 0.08
ACKR3P25106 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.54■□□□□ 0.08
ACKR3P25106 AL031432.5-201ENST00000641059 760 ntBASIC15.54■□□□□ 0.08
ACKR3P25106 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.54■□□□□ 0.08
ACKR3P25106 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.54■□□□□ 0.08
ACKR3P25106 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
ACKR3P25106 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.54■□□□□ 0.08
ACKR3P25106 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ACKR3P25106 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
ACKR3P25106 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ACKR3P25106 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.54■□□□□ 0.08
ACKR3P25106 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ACKR3P25106 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
ACKR3P25106 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ACKR3P25106 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ACKR3P25106 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms