Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AP002414.4-201ENST00000589764 1148 ntBASIC19.48■□□□□ 0.71
RFX1P22670 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
RFX1P22670 AC006538.3-201ENST00000612495 578 ntBASIC19.48■□□□□ 0.71
RFX1P22670 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
RFX1P22670 LINC00167-201ENST00000530583 1419 ntBASIC19.48■□□□□ 0.71
RFX1P22670 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFX1P22670 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFX1P22670 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.48■□□□□ 0.71
RFX1P22670 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFX1P22670 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
RFX1P22670 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFX1P22670 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFX1P22670 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFX1P22670 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RFX1P22670 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
RFX1P22670 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RFX1P22670 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.47■□□□□ 0.71
RFX1P22670 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RFX1P22670 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
RFX1P22670 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFX1P22670 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFX1P22670 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.47■□□□□ 0.71
RFX1P22670 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFX1P22670 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.47■□□□□ 0.71
RFX1P22670 SPDYE13P-201ENST00000445314 798 ntBASIC19.47■□□□□ 0.71
RFX1P22670 AC079776.4-201ENST00000511039 504 ntBASIC19.47■□□□□ 0.71
RFX1P22670 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFX1P22670 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.47■□□□□ 0.71
RFX1P22670 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.47■□□□□ 0.71
RFX1P22670 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.47■□□□□ 0.71
RFX1P22670 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.47■□□□□ 0.71
RFX1P22670 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFX1P22670 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFX1P22670 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFX1P22670 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.47■□□□□ 0.71
RFX1P22670 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFX1P22670 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
RFX1P22670 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
RFX1P22670 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
RFX1P22670 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
RFX1P22670 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFX1P22670 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFX1P22670 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFX1P22670 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFX1P22670 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RFX1P22670 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RFX1P22670 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
RFX1P22670 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
RFX1P22670 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RFX1P22670 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFX1P22670 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
RFX1P22670 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.46■□□□□ 0.71
RFX1P22670 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.46■□□□□ 0.71
RFX1P22670 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.46■□□□□ 0.71
RFX1P22670 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFX1P22670 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFX1P22670 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RFX1P22670 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.46■□□□□ 0.71
RFX1P22670 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
RFX1P22670 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.46■□□□□ 0.71
RFX1P22670 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFX1P22670 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFX1P22670 KRT18P1-202ENST00000452408 1331 ntBASIC19.46■□□□□ 0.71
RFX1P22670 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.46■□□□□ 0.71
RFX1P22670 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFX1P22670 AC026471.1-201ENST00000564629 3026 ntBASIC19.46■□□□□ 0.71
RFX1P22670 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFX1P22670 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
RFX1P22670 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFX1P22670 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RFX1P22670 AC016734.2-201ENST00000624325 1377 ntBASIC19.45■□□□□ 0.7
RFX1P22670 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFX1P22670 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
RFX1P22670 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RFX1P22670 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RFX1P22670 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFX1P22670 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFX1P22670 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RFX1P22670 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RFX1P22670 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.45■□□□□ 0.7
RFX1P22670 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
RFX1P22670 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.45■□□□□ 0.7
RFX1P22670 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RFX1P22670 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RFX1P22670 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RFX1P22670 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RFX1P22670 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RFX1P22670 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.45■□□□□ 0.7
RFX1P22670 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RFX1P22670 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.45■□□□□ 0.7
RFX1P22670 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.45■□□□□ 0.7
RFX1P22670 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFX1P22670 AC091304.2-201ENST00000564639 760 ntBASIC19.45■□□□□ 0.7
RFX1P22670 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.45■□□□□ 0.7
RFX1P22670 AL121772.3-201ENST00000610840 674 ntBASIC19.45■□□□□ 0.7
RFX1P22670 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.45■□□□□ 0.7
RFX1P22670 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.45■□□□□ 0.7
RFX1P22670 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.45■□□□□ 0.7
RFX1P22670 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFX1P22670 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms