Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.21■□□□□ 0.51
NFKB1P19838 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.21■□□□□ 0.51
NFKB1P19838 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.21■□□□□ 0.51
NFKB1P19838 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
NFKB1P19838 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NFKB1P19838 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.21■□□□□ 0.51
NFKB1P19838 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NFKB1P19838 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
NFKB1P19838 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NFKB1P19838 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
NFKB1P19838 AC009949.1-201ENST00000623048 1830 ntBASIC18.21■□□□□ 0.51
NFKB1P19838 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.21■□□□□ 0.5
NFKB1P19838 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
NFKB1P19838 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.2■□□□□ 0.5
NFKB1P19838 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NFKB1P19838 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.2■□□□□ 0.5
NFKB1P19838 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.2■□□□□ 0.5
NFKB1P19838 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.2■□□□□ 0.5
NFKB1P19838 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NFKB1P19838 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NFKB1P19838 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
NFKB1P19838 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NFKB1P19838 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.2■□□□□ 0.5
NFKB1P19838 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.2■□□□□ 0.5
NFKB1P19838 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.2■□□□□ 0.5
NFKB1P19838 AC112698.1-201ENST00000510299 916 ntBASIC18.2■□□□□ 0.5
NFKB1P19838 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.2■□□□□ 0.5
NFKB1P19838 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
NFKB1P19838 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NFKB1P19838 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.19■□□□□ 0.5
NFKB1P19838 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
NFKB1P19838 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
NFKB1P19838 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NFKB1P19838 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
NFKB1P19838 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
NFKB1P19838 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NFKB1P19838 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.19■□□□□ 0.5
NFKB1P19838 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
NFKB1P19838 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
NFKB1P19838 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.19■□□□□ 0.5
NFKB1P19838 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NFKB1P19838 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NFKB1P19838 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NFKB1P19838 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
NFKB1P19838 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NFKB1P19838 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NFKB1P19838 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NFKB1P19838 AL031133.1-201ENST00000406807 723 ntBASIC18.19■□□□□ 0.5
NFKB1P19838 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NFKB1P19838 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.19■□□□□ 0.5
NFKB1P19838 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NFKB1P19838 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.19■□□□□ 0.5
NFKB1P19838 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
NFKB1P19838 NTF6B-201ENST00000591913 560 ntBASIC18.19■□□□□ 0.5
NFKB1P19838 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
NFKB1P19838 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NFKB1P19838 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
NFKB1P19838 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NFKB1P19838 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NFKB1P19838 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.19■□□□□ 0.5
NFKB1P19838 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NFKB1P19838 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NFKB1P19838 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NFKB1P19838 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NFKB1P19838 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NFKB1P19838 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
NFKB1P19838 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NFKB1P19838 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
NFKB1P19838 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NFKB1P19838 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
NFKB1P19838 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NFKB1P19838 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.18■□□□□ 0.5
NFKB1P19838 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.18■□□□□ 0.5
NFKB1P19838 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NFKB1P19838 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NFKB1P19838 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NFKB1P19838 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.18■□□□□ 0.5
NFKB1P19838 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
NFKB1P19838 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.18■□□□□ 0.5
NFKB1P19838 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NFKB1P19838 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.18■□□□□ 0.5
NFKB1P19838 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.18■□□□□ 0.5
NFKB1P19838 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NFKB1P19838 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.18■□□□□ 0.5
NFKB1P19838 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NFKB1P19838 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.18■□□□□ 0.5
NFKB1P19838 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.18■□□□□ 0.5
NFKB1P19838 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.18■□□□□ 0.5
NFKB1P19838 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NFKB1P19838 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.18■□□□□ 0.5
NFKB1P19838 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.18■□□□□ 0.5
NFKB1P19838 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.18■□□□□ 0.5
NFKB1P19838 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NFKB1P19838 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NFKB1P19838 AL355312.1-201ENST00000407115 2176 ntBASIC18.18■□□□□ 0.5
NFKB1P19838 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NFKB1P19838 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NFKB1P19838 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
NFKB1P19838 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NFKB1P19838 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms