Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ERCC2P18074 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ERCC2P18074 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ERCC2P18074 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.41■□□□□ 0.54
ERCC2P18074 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
ERCC2P18074 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.41■□□□□ 0.54
ERCC2P18074 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
ERCC2P18074 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
ERCC2P18074 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ERCC2P18074 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.41■□□□□ 0.54
ERCC2P18074 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ERCC2P18074 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
ERCC2P18074 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ERCC2P18074 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ERCC2P18074 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ERCC2P18074 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ERCC2P18074 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.41■□□□□ 0.54
ERCC2P18074 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ERCC2P18074 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ERCC2P18074 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ERCC2P18074 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
ERCC2P18074 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ERCC2P18074 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ERCC2P18074 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.4■□□□□ 0.54
ERCC2P18074 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.4■□□□□ 0.54
ERCC2P18074 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ERCC2P18074 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
ERCC2P18074 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ERCC2P18074 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ERCC2P18074 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ERCC2P18074 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ERCC2P18074 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
ERCC2P18074 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
ERCC2P18074 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ERCC2P18074 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ERCC2P18074 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
ERCC2P18074 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ERCC2P18074 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ERCC2P18074 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ERCC2P18074 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ERCC2P18074 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.4■□□□□ 0.54
ERCC2P18074 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.4■□□□□ 0.54
ERCC2P18074 CHCHD2P8-201ENST00000429873 447 ntBASIC18.4■□□□□ 0.54
ERCC2P18074 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ERCC2P18074 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.4■□□□□ 0.54
ERCC2P18074 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.4■□□□□ 0.54
ERCC2P18074 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
ERCC2P18074 AC116407.2-201ENST00000613639 860 ntBASIC18.4■□□□□ 0.54
ERCC2P18074 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
ERCC2P18074 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ERCC2P18074 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
ERCC2P18074 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.4■□□□□ 0.54
ERCC2P18074 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.4■□□□□ 0.54
ERCC2P18074 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ERCC2P18074 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
ERCC2P18074 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.39■□□□□ 0.54
ERCC2P18074 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
ERCC2P18074 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ERCC2P18074 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.39■□□□□ 0.53
ERCC2P18074 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
ERCC2P18074 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
ERCC2P18074 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
ERCC2P18074 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
ERCC2P18074 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
ERCC2P18074 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ERCC2P18074 AL845331.1-201ENST00000424978 1190 ntBASIC18.39■□□□□ 0.53
ERCC2P18074 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ERCC2P18074 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.39■□□□□ 0.53
ERCC2P18074 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
ERCC2P18074 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
ERCC2P18074 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ERCC2P18074 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ERCC2P18074 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.39■□□□□ 0.53
ERCC2P18074 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ERCC2P18074 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ERCC2P18074 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
ERCC2P18074 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ERCC2P18074 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
ERCC2P18074 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ERCC2P18074 PCDHB18P-201ENST00000524813 2368 ntBASIC18.38■□□□□ 0.53
ERCC2P18074 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ERCC2P18074 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.38■□□□□ 0.53
ERCC2P18074 TSSC2-201ENST00000450217 709 ntBASIC18.38■□□□□ 0.53
ERCC2P18074 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.38■□□□□ 0.53
ERCC2P18074 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.38■□□□□ 0.53
ERCC2P18074 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
ERCC2P18074 AL353801.3-201ENST00000609898 542 ntBASIC18.38■□□□□ 0.53
ERCC2P18074 AC091076.1-201ENST00000610741 619 ntBASIC18.38■□□□□ 0.53
ERCC2P18074 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.38■□□□□ 0.53
ERCC2P18074 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.38■□□□□ 0.53
ERCC2P18074 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
ERCC2P18074 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
ERCC2P18074 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ERCC2P18074 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ERCC2P18074 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
ERCC2P18074 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ERCC2P18074 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
ERCC2P18074 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ERCC2P18074 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ERCC2P18074 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms