Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.8■□□□□ 0.76
SMPD1P17405 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SMPD1P17405 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SMPD1P17405 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMPD1P17405 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.8■□□□□ 0.76
SMPD1P17405 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.8■□□□□ 0.76
SMPD1P17405 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.8■□□□□ 0.76
SMPD1P17405 MTDHP5-201ENST00000598980 586 ntBASIC19.8■□□□□ 0.76
SMPD1P17405 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19.8■□□□□ 0.76
SMPD1P17405 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.8■□□□□ 0.76
SMPD1P17405 AC019129.2-201ENST00000609837 1235 ntBASIC19.8■□□□□ 0.76
SMPD1P17405 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.8■□□□□ 0.76
SMPD1P17405 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.8■□□□□ 0.76
SMPD1P17405 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SMPD1P17405 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.8■□□□□ 0.76
SMPD1P17405 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMPD1P17405 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMPD1P17405 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.8■□□□□ 0.76
SMPD1P17405 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
SMPD1P17405 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMPD1P17405 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMPD1P17405 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.8■□□□□ 0.76
SMPD1P17405 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
SMPD1P17405 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SMPD1P17405 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SMPD1P17405 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMPD1P17405 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.8■□□□□ 0.76
SMPD1P17405 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMPD1P17405 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMPD1P17405 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.8■□□□□ 0.76
SMPD1P17405 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.79■□□□□ 0.76
SMPD1P17405 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SMPD1P17405 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMPD1P17405 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMPD1P17405 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.79■□□□□ 0.76
SMPD1P17405 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMPD1P17405 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMPD1P17405 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.79■□□□□ 0.76
SMPD1P17405 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.79■□□□□ 0.76
SMPD1P17405 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.79■□□□□ 0.76
SMPD1P17405 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.79■□□□□ 0.76
SMPD1P17405 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.79■□□□□ 0.76
SMPD1P17405 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.79■□□□□ 0.76
SMPD1P17405 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.79■□□□□ 0.76
SMPD1P17405 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.79■□□□□ 0.76
SMPD1P17405 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMPD1P17405 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMPD1P17405 AC093677.2-201ENST00000600169 1863 ntBASIC19.79■□□□□ 0.76
SMPD1P17405 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMPD1P17405 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMPD1P17405 AC100803.2-201ENST00000562459 1963 ntBASIC19.79■□□□□ 0.76
SMPD1P17405 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SMPD1P17405 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SMPD1P17405 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMPD1P17405 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMPD1P17405 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMPD1P17405 AC120498.9-201ENST00000339021 3867 ntBASIC19.78■□□□□ 0.76
SMPD1P17405 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.78■□□□□ 0.76
SMPD1P17405 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SMPD1P17405 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.78■□□□□ 0.76
SMPD1P17405 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SMPD1P17405 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMPD1P17405 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMPD1P17405 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMPD1P17405 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMPD1P17405 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMPD1P17405 KLF4P1-201ENST00000412782 1185 ntBASIC19.78■□□□□ 0.76
SMPD1P17405 PMS2P2-201ENST00000425039 1128 ntBASIC19.78■□□□□ 0.76
SMPD1P17405 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SMPD1P17405 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.78■□□□□ 0.76
SMPD1P17405 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.78■□□□□ 0.76
SMPD1P17405 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.78■□□□□ 0.76
SMPD1P17405 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SMPD1P17405 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.78■□□□□ 0.76
SMPD1P17405 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMPD1P17405 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMPD1P17405 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SMPD1P17405 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMPD1P17405 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SMPD1P17405 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMPD1P17405 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
SMPD1P17405 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.77■□□□□ 0.76
SMPD1P17405 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMPD1P17405 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMPD1P17405 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMPD1P17405 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMPD1P17405 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SMPD1P17405 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.77■□□□□ 0.76
SMPD1P17405 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.77■□□□□ 0.76
SMPD1P17405 AC079781.4-201ENST00000641908 219 ntBASIC19.77■□□□□ 0.76
SMPD1P17405 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SMPD1P17405 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMPD1P17405 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.77■□□□□ 0.76
SMPD1P17405 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SMPD1P17405 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.77■□□□□ 0.75
SMPD1P17405 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SMPD1P17405 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SMPD1P17405 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SMPD1P17405 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SMPD1P17405 NCF1C-201ENST00000438382 1427 ntBASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms