Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TOP1P11387 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.99■□□□□ 0.95
TOP1P11387 AC111152.3-201ENST00000569699 673 ntBASIC20.99■□□□□ 0.95
TOP1P11387 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.99■□□□□ 0.95
TOP1P11387 AL691432.3-201ENST00000621860 400 ntBASIC20.99■□□□□ 0.95
TOP1P11387 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
TOP1P11387 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TOP1P11387 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TOP1P11387 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
TOP1P11387 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.99■□□□□ 0.95
TOP1P11387 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.99■□□□□ 0.95
TOP1P11387 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TOP1P11387 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.99■□□□□ 0.95
TOP1P11387 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TOP1P11387 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TOP1P11387 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.99■□□□□ 0.95
TOP1P11387 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TOP1P11387 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TOP1P11387 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
TOP1P11387 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TOP1P11387 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.98■□□□□ 0.95
TOP1P11387 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TOP1P11387 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TOP1P11387 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TOP1P11387 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
TOP1P11387 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TOP1P11387 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TOP1P11387 AC125634.1-201ENST00000438758 1403 ntBASIC20.98■□□□□ 0.95
TOP1P11387 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TOP1P11387 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TOP1P11387 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TOP1P11387 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TOP1P11387 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TOP1P11387 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TOP1P11387 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TOP1P11387 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TOP1P11387 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.98■□□□□ 0.95
TOP1P11387 KRT16P4-201ENST00000453883 522 ntBASIC20.98■□□□□ 0.95
TOP1P11387 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TOP1P11387 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.98■□□□□ 0.95
TOP1P11387 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.98■□□□□ 0.95
TOP1P11387 IFNL4P1-201ENST00000607083 540 ntBASIC20.98■□□□□ 0.95
TOP1P11387 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
TOP1P11387 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TOP1P11387 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TOP1P11387 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
TOP1P11387 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TOP1P11387 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TOP1P11387 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TOP1P11387 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TOP1P11387 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TOP1P11387 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.97■□□□□ 0.95
TOP1P11387 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TOP1P11387 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.97■□□□□ 0.95
TOP1P11387 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
TOP1P11387 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.97■□□□□ 0.95
TOP1P11387 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TOP1P11387 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
TOP1P11387 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TOP1P11387 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TOP1P11387 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TOP1P11387 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TOP1P11387 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TOP1P11387 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
TOP1P11387 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TOP1P11387 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TOP1P11387 NUS1P2-201ENST00000417358 873 ntBASIC20.97■□□□□ 0.95
TOP1P11387 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.97■□□□□ 0.95
TOP1P11387 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.97■□□□□ 0.95
TOP1P11387 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.97■□□□□ 0.95
TOP1P11387 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.97■□□□□ 0.95
TOP1P11387 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.97■□□□□ 0.95
TOP1P11387 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
TOP1P11387 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TOP1P11387 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.97■□□□□ 0.95
TOP1P11387 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TOP1P11387 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TOP1P11387 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.97■□□□□ 0.95
TOP1P11387 AC022898.2-201ENST00000616822 1312 ntBASIC20.97■□□□□ 0.95
TOP1P11387 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC20.97■□□□□ 0.95
TOP1P11387 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TOP1P11387 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TOP1P11387 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TOP1P11387 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TOP1P11387 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.96■□□□□ 0.95
TOP1P11387 NOC2LP2-201ENST00000407594 1944 ntBASIC20.96■□□□□ 0.95
TOP1P11387 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
TOP1P11387 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TOP1P11387 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TOP1P11387 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
TOP1P11387 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TOP1P11387 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.96■□□□□ 0.95
TOP1P11387 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.96■□□□□ 0.95
TOP1P11387 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TOP1P11387 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TOP1P11387 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TOP1P11387 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.96■□□□□ 0.95
TOP1P11387 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.96■□□□□ 0.95
TOP1P11387 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TOP1P11387 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms