Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.23■□□□□ 0.19
FREM3P0C091 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
FREM3P0C091 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FREM3P0C091 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FREM3P0C091 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
FREM3P0C091 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FREM3P0C091 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FREM3P0C091 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FREM3P0C091 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.23■□□□□ 0.19
FREM3P0C091 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
FREM3P0C091 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
FREM3P0C091 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
FREM3P0C091 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.22■□□□□ 0.19
FREM3P0C091 AC009154.2-201ENST00000621177 724 ntBASIC16.22■□□□□ 0.19
FREM3P0C091 TP73-AS1-207ENST00000624167 988 ntBASIC16.22■□□□□ 0.19
FREM3P0C091 AP005117.1-201ENST00000584346 1413 ntBASIC16.22■□□□□ 0.19
FREM3P0C091 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
FREM3P0C091 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
FREM3P0C091 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.22■□□□□ 0.19
FREM3P0C091 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FREM3P0C091 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FREM3P0C091 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FREM3P0C091 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FREM3P0C091 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FREM3P0C091 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
FREM3P0C091 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FREM3P0C091 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
FREM3P0C091 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.22■□□□□ 0.19
FREM3P0C091 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.22■□□□□ 0.19
FREM3P0C091 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FREM3P0C091 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.22■□□□□ 0.19
FREM3P0C091 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
FREM3P0C091 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
FREM3P0C091 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FREM3P0C091 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
FREM3P0C091 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.22■□□□□ 0.19
FREM3P0C091 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.22■□□□□ 0.19
FREM3P0C091 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
FREM3P0C091 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC16.22■□□□□ 0.19
FREM3P0C091 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
FREM3P0C091 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FREM3P0C091 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FREM3P0C091 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FREM3P0C091 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
FREM3P0C091 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
FREM3P0C091 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
FREM3P0C091 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
FREM3P0C091 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
FREM3P0C091 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FREM3P0C091 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.21■□□□□ 0.19
FREM3P0C091 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
FREM3P0C091 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
FREM3P0C091 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FREM3P0C091 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.21■□□□□ 0.19
FREM3P0C091 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FREM3P0C091 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FREM3P0C091 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FREM3P0C091 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
FREM3P0C091 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
FREM3P0C091 AC068472.1-201ENST00000474589 881 ntBASIC16.21■□□□□ 0.19
FREM3P0C091 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.21■□□□□ 0.19
FREM3P0C091 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.21■□□□□ 0.19
FREM3P0C091 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
FREM3P0C091 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FREM3P0C091 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
FREM3P0C091 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
FREM3P0C091 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.21■□□□□ 0.19
FREM3P0C091 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.21■□□□□ 0.19
FREM3P0C091 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
FREM3P0C091 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.21■□□□□ 0.19
FREM3P0C091 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FREM3P0C091 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
FREM3P0C091 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
FREM3P0C091 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
FREM3P0C091 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FREM3P0C091 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
FREM3P0C091 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.21■□□□□ 0.19
FREM3P0C091 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
FREM3P0C091 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FREM3P0C091 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FREM3P0C091 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
FREM3P0C091 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
FREM3P0C091 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
FREM3P0C091 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
FREM3P0C091 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
FREM3P0C091 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
FREM3P0C091 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.18
FREM3P0C091 NUS1P1-201ENST00000446295 882 ntBASIC16.21■□□□□ 0.18
FREM3P0C091 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.21■□□□□ 0.18
FREM3P0C091 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.18
FREM3P0C091 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
FREM3P0C091 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FREM3P0C091 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FREM3P0C091 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
FREM3P0C091 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.2■□□□□ 0.18
FREM3P0C091 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
FREM3P0C091 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
FREM3P0C091 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
FREM3P0C091 PCDHB18P-201ENST00000524813 2368 ntBASIC16.2■□□□□ 0.18
FREM3P0C091 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms