Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
ERCC1P07992 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.89■□□□□ 0.13
ERCC1P07992 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ERCC1P07992 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
ERCC1P07992 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ERCC1P07992 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ERCC1P07992 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ERCC1P07992 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC15.89■□□□□ 0.13
ERCC1P07992 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC15.89■□□□□ 0.13
ERCC1P07992 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ERCC1P07992 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC15.89■□□□□ 0.13
ERCC1P07992 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.89■□□□□ 0.13
ERCC1P07992 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC15.89■□□□□ 0.13
ERCC1P07992 AC009065.1-201ENST00000564055 1225 ntBASIC15.89■□□□□ 0.13
ERCC1P07992 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ERCC1P07992 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ERCC1P07992 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ERCC1P07992 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
ERCC1P07992 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
ERCC1P07992 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
ERCC1P07992 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
ERCC1P07992 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ERCC1P07992 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ERCC1P07992 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ERCC1P07992 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ERCC1P07992 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.88■□□□□ 0.13
ERCC1P07992 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
ERCC1P07992 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ERCC1P07992 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ERCC1P07992 LINC01311-201ENST00000565162 1445 ntBASIC15.88■□□□□ 0.13
ERCC1P07992 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
ERCC1P07992 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ERCC1P07992 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.88■□□□□ 0.13
ERCC1P07992 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.88■□□□□ 0.13
ERCC1P07992 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ERCC1P07992 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ERCC1P07992 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.88■□□□□ 0.13
ERCC1P07992 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ERCC1P07992 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.88■□□□□ 0.13
ERCC1P07992 PCED1CP-201ENST00000419887 785 ntBASIC15.88■□□□□ 0.13
ERCC1P07992 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.88■□□□□ 0.13
ERCC1P07992 CD81-212ENST00000526072 1172 ntTSL 5 BASIC15.88■□□□□ 0.13
ERCC1P07992 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC15.88■□□□□ 0.13
ERCC1P07992 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ERCC1P07992 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.88■□□□□ 0.13
ERCC1P07992 ZNF444P1-201ENST00000559497 298 ntBASIC15.88■□□□□ 0.13
ERCC1P07992 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.88■□□□□ 0.13
ERCC1P07992 AC024243.1-201ENST00000609234 778 ntBASIC15.88■□□□□ 0.13
ERCC1P07992 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
ERCC1P07992 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.88■□□□□ 0.13
ERCC1P07992 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ERCC1P07992 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
ERCC1P07992 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ERCC1P07992 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
ERCC1P07992 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ERCC1P07992 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.88■□□□□ 0.13
ERCC1P07992 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ERCC1P07992 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.88■□□□□ 0.13
ERCC1P07992 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ERCC1P07992 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ERCC1P07992 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC15.88■□□□□ 0.13
ERCC1P07992 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.88■□□□□ 0.13
ERCC1P07992 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
ERCC1P07992 LINC00896-202ENST00000609602 2128 ntBASIC15.88■□□□□ 0.13
ERCC1P07992 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ERCC1P07992 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.87■□□□□ 0.13
ERCC1P07992 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ERCC1P07992 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ERCC1P07992 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.87■□□□□ 0.13
ERCC1P07992 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ERCC1P07992 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ERCC1P07992 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ERCC1P07992 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ERCC1P07992 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ERCC1P07992 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
ERCC1P07992 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ERCC1P07992 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.87■□□□□ 0.13
ERCC1P07992 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
ERCC1P07992 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
ERCC1P07992 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ERCC1P07992 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
ERCC1P07992 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.87■□□□□ 0.13
ERCC1P07992 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ERCC1P07992 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.87■□□□□ 0.13
ERCC1P07992 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC15.87■□□□□ 0.13
ERCC1P07992 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC15.87■□□□□ 0.13
ERCC1P07992 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ERCC1P07992 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15.87■□□□□ 0.13
ERCC1P07992 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC15.87■□□□□ 0.13
ERCC1P07992 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
ERCC1P07992 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ERCC1P07992 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ERCC1P07992 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ERCC1P07992 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
ERCC1P07992 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ERCC1P07992 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ERCC1P07992 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
ERCC1P07992 AL096828.2-201ENST00000567259 1965 ntBASIC15.87■□□□□ 0.13
ERCC1P07992 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
ERCC1P07992 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms